Analysis of interatomic Contacts of Structural Units in PDB entry:
8XAT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XAT entry

There are 2 chains in PDB entry 8XAT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 31LEU 295
B
 GLU 31GLY 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 8XAT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
45 59Right-handed alpha
Helix 2
AA2
A
68 79Right-handed alpha
Helix 3
AA3
A
96 106Right-handed alpha
Helix 4
AA4
A
120 130Right-handed alpha
Helix 5
AA5
A
141 147Right-handed alpha
Helix 6
AA6
A
148 151Right-handed 310
Helix 7
AA7
A
243 258Right-handed alpha
Helix 8
AA8
A
263 272Right-handed alpha
Helix 9
AA9
A
277 295Right-handed alpha
Helix 10
AB1
B
45 59Right-handed alpha
Helix 11
AB2
B
68 79Right-handed alpha
Helix 12
AB3
B
96 106Right-handed alpha
Helix 13
AB4
B
120 130Right-handed alpha
Helix 14
AB5
B
141 147Right-handed alpha
Helix 15
AB6
B
148 151Right-handed 310
Helix 16
AB7
B
243 258Right-handed alpha
Helix 17
AB8
B
263 272Right-handed alpha
Helix 18
AB9
B
277 296Right-handed alpha
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There are 4 sheets in PDB entry 8XAT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 35first strand
Strand 2
B
33 35anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 66first strand
Strand 2
A
38 42parallel
Strand 3
A
85 89parallel
Strand 4
A
112 116parallel
Strand 5
A
134 137parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 155first strand
Strand 2
B
153 155anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 66first strand
Strand 2
B
38 42parallel
Strand 3
B
85 89parallel
Strand 4
B
112 116parallel
Strand 5
B
134 137parallel
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