Analysis of interatomic Contacts of Structural Units in PDB entry:
8XDA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XDA entry

There are 3 chains in PDB entry 8XDA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 52GLN 379
B
 SER 52GLN 379
C
 SER 52GLN 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 8XDA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
52 68Right-handed alpha
Helix 2
AA2
A
73 88Right-handed alpha
Helix 3
AA3
A
88 109Right-handed alpha
Helix 4
AA4
A
112 117Right-handed alpha
Helix 5
AA5
A
122 135Right-handed alpha
Helix 6
AA6
A
142 144Right-handed 310
Helix 7
AA7
A
145 167Right-handed alpha
Helix 8
AA8
A
176 191Right-handed alpha
Helix 9
AA9
A
212 216Right-handed 310
Helix 10
AB1
A
217 231Right-handed alpha
Helix 11
AB2
A
232 234Right-handed 310
Helix 12
AB3
A
237 252Right-handed alpha
Helix 13
AB4
A
252 273Right-handed alpha
Helix 14
AB5
A
276 283Right-handed alpha
Helix 15
AB6
A
286 297Right-handed alpha
Helix 16
AB7
A
304 330Right-handed alpha
Helix 17
AB8
A
338 350Right-handed alpha
Helix 18
AB9
A
362 366Right-handed 310
Helix 19
AC1
A
368 379Right-handed alpha
Helix 20
AC2
B
53 67Right-handed alpha
Helix 21
AC3
B
68 70Right-handed 310
Helix 22
AC4
B
73 88Right-handed alpha
Helix 23
AC5
B
88 109Right-handed alpha
Helix 24
AC6
B
112 117Right-handed alpha
Helix 25
AC7
B
122 135Right-handed alpha
Helix 26
AC8
B
142 144Right-handed 310
Helix 27
AC9
B
145 167Right-handed alpha
Helix 28
AD1
B
176 191Right-handed alpha
Helix 29
AD2
B
212 216Right-handed 310
Helix 30
AD3
B
217 231Right-handed alpha
Helix 31
AD4
B
232 234Right-handed 310
Helix 32
AD5
B
237 252Right-handed alpha
Helix 33
AD6
B
252 273Right-handed alpha
Helix 34
AD7
B
276 283Right-handed alpha
Helix 35
AD8
B
286 297Right-handed alpha
Helix 36
AD9
B
304 330Right-handed alpha
Helix 37
AE1
B
338 350Right-handed alpha
Helix 38
AE2
B
362 366Right-handed 310
Helix 39
AE3
B
368 379Right-handed alpha
Helix 40
AE4
C
53 67Right-handed alpha
Helix 41
AE5
C
68 70Right-handed 310
Helix 42
AE6
C
73 88Right-handed alpha
Helix 43
AE7
C
88 109Right-handed alpha
Helix 44
AE8
C
112 117Right-handed alpha
Helix 45
AE9
C
122 135Right-handed alpha
Helix 46
AF1
C
142 144Right-handed 310
Helix 47
AF2
C
145 167Right-handed alpha
Helix 48
AF3
C
176 191Right-handed alpha
Helix 49
AF4
C
212 216Right-handed 310
Helix 50
AF5
C
217 231Right-handed alpha
Helix 51
AF6
C
232 234Right-handed 310
Helix 52
AF7
C
237 252Right-handed alpha
Helix 53
AF8
C
252 273Right-handed alpha
Helix 54
AF9
C
276 283Right-handed alpha
Helix 55
AG1
C
286 297Right-handed alpha
Helix 56
AG2
C
304 330Right-handed alpha
Helix 57
AG3
C
338 350Right-handed alpha
Helix 58
AG4
C
362 366Right-handed 310
Helix 59
AG5
C
368 379Right-handed alpha
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There are no sheets in PDB entry 8XDA
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