Analysis of interatomic Contacts of Structural Units in PDB entry:
8XDF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XDF entry

There are 3 chains in PDB entry 8XDF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 34ARG 383
B
 ALA 34ARG 383
C
 ALA 34ARG 383
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 8XDF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 38Right-handed 310
Helix 2
AA2
A
42 50Right-handed alpha
Helix 3
AA3
A
53 68Right-handed alpha
Helix 4
AA4
A
69 71Right-handed 310
Helix 5
AA5
A
74 89Right-handed alpha
Helix 6
AA6
A
89 110Right-handed alpha
Helix 7
AA7
A
113 119Right-handed alpha
Helix 8
AA8
A
123 136Right-handed alpha
Helix 9
AA9
A
143 145Right-handed 310
Helix 10
AB1
A
146 169Right-handed alpha
Helix 11
AB2
A
170 172Right-handed 310
Helix 12
AB3
A
177 192Right-handed alpha
Helix 13
AB4
A
213 217Right-handed 310
Helix 14
AB5
A
218 232Right-handed alpha
Helix 15
AB6
A
233 235Right-handed 310
Helix 16
AB7
A
238 253Right-handed alpha
Helix 17
AB8
A
253 274Right-handed alpha
Helix 18
AB9
A
277 283Right-handed alpha
Helix 19
AC1
A
287 298Right-handed alpha
Helix 20
AC2
A
305 332Right-handed alpha
Helix 21
AC3
A
339 352Right-handed alpha
Helix 22
AC4
A
369 383Right-handed alpha
Helix 23
AC5
B
34 38Right-handed 310
Helix 24
AC6
B
42 50Right-handed alpha
Helix 25
AC7
B
53 68Right-handed alpha
Helix 26
AC8
B
69 71Right-handed 310
Helix 27
AC9
B
74 89Right-handed alpha
Helix 28
AD1
B
89 110Right-handed alpha
Helix 29
AD2
B
113 119Right-handed alpha
Helix 30
AD3
B
123 136Right-handed alpha
Helix 31
AD4
B
143 145Right-handed 310
Helix 32
AD5
B
146 169Right-handed alpha
Helix 33
AD6
B
170 172Right-handed 310
Helix 34
AD7
B
177 192Right-handed alpha
Helix 35
AD8
B
213 217Right-handed 310
Helix 36
AD9
B
218 232Right-handed alpha
Helix 37
AE1
B
233 235Right-handed 310
Helix 38
AE2
B
238 253Right-handed alpha
Helix 39
AE3
B
253 274Right-handed alpha
Helix 40
AE4
B
277 283Right-handed alpha
Helix 41
AE5
B
288 298Right-handed alpha
Helix 42
AE6
B
305 332Right-handed alpha
Helix 43
AE7
B
339 352Right-handed alpha
Helix 44
AE8
B
369 383Right-handed alpha
Helix 45
AE9
C
34 38Right-handed 310
Helix 46
AF1
C
42 50Right-handed alpha
Helix 47
AF2
C
53 68Right-handed alpha
Helix 48
AF3
C
69 71Right-handed 310
Helix 49
AF4
C
74 89Right-handed alpha
Helix 50
AF5
C
89 110Right-handed alpha
Helix 51
AF6
C
113 119Right-handed alpha
Helix 52
AF7
C
123 136Right-handed alpha
Helix 53
AF8
C
143 145Right-handed 310
Helix 54
AF9
C
146 169Right-handed alpha
Helix 55
AG1
C
170 172Right-handed 310
Helix 56
AG2
C
177 192Right-handed alpha
Helix 57
AG3
C
213 217Right-handed 310
Helix 58
AG4
C
218 232Right-handed alpha
Helix 59
AG5
C
233 235Right-handed 310
Helix 60
AG6
C
238 253Right-handed alpha
Helix 61
AG7
C
253 274Right-handed alpha
Helix 62
AG8
C
277 283Right-handed alpha
Helix 63
AG9
C
288 298Right-handed alpha
Helix 64
AH1
C
305 332Right-handed alpha
Helix 65
AH2
C
339 352Right-handed alpha
Helix 66
AH3
C
369 383Right-handed alpha
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There are no sheets in PDB entry 8XDF
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