Analysis of interatomic Contacts of Structural Units in PDB entry:
8XDG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XDG entry

There are 3 chains in PDB entry 8XDG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 31LYS 380
B
 ILE 31LYS 380
C
 ILE 31LYS 380
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 8XDG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 38Right-handed alpha
Helix 2
AA2
A
41 51Right-handed alpha
Helix 3
AA3
A
52 66Right-handed alpha
Helix 4
AA4
A
67 70Right-handed 310
Helix 5
AA5
A
73 88Right-handed alpha
Helix 6
AA6
A
88 109Right-handed alpha
Helix 7
AA7
A
122 135Right-handed alpha
Helix 8
AA8
A
142 144Right-handed 310
Helix 9
AA9
A
145 168Right-handed alpha
Helix 10
AB1
A
176 191Right-handed alpha
Helix 11
AB2
A
212 216Right-handed 310
Helix 12
AB3
A
217 231Right-handed alpha
Helix 13
AB4
A
232 234Right-handed 310
Helix 14
AB5
A
237 252Right-handed alpha
Helix 15
AB6
A
252 273Right-handed alpha
Helix 16
AB7
A
276 283Right-handed alpha
Helix 17
AB8
A
286 299Right-handed alpha
Helix 18
AB9
A
304 330Right-handed alpha
Helix 19
AC1
A
338 349Right-handed alpha
Helix 20
AC2
A
362 366Right-handed 310
Helix 21
AC3
A
368 380Right-handed alpha
Helix 22
AC4
B
32 38Right-handed alpha
Helix 23
AC5
B
41 51Right-handed alpha
Helix 24
AC6
B
52 66Right-handed alpha
Helix 25
AC7
B
67 70Right-handed 310
Helix 26
AC8
B
73 88Right-handed alpha
Helix 27
AC9
B
88 109Right-handed alpha
Helix 28
AD1
B
122 135Right-handed alpha
Helix 29
AD2
B
142 144Right-handed 310
Helix 30
AD3
B
145 168Right-handed alpha
Helix 31
AD4
B
176 191Right-handed alpha
Helix 32
AD5
B
212 216Right-handed 310
Helix 33
AD6
B
217 231Right-handed alpha
Helix 34
AD7
B
232 234Right-handed 310
Helix 35
AD8
B
237 252Right-handed alpha
Helix 36
AD9
B
252 273Right-handed alpha
Helix 37
AE1
B
276 283Right-handed alpha
Helix 38
AE2
B
286 299Right-handed alpha
Helix 39
AE3
B
304 330Right-handed alpha
Helix 40
AE4
B
338 349Right-handed alpha
Helix 41
AE5
B
362 366Right-handed 310
Helix 42
AE6
B
368 380Right-handed alpha
Helix 43
AE7
C
32 38Right-handed alpha
Helix 44
AE8
C
41 51Right-handed alpha
Helix 45
AE9
C
52 66Right-handed alpha
Helix 46
AF1
C
67 70Right-handed 310
Helix 47
AF2
C
73 88Right-handed alpha
Helix 48
AF3
C
88 109Right-handed alpha
Helix 49
AF4
C
122 135Right-handed alpha
Helix 50
AF5
C
142 144Right-handed 310
Helix 51
AF6
C
145 168Right-handed alpha
Helix 52
AF7
C
176 191Right-handed alpha
Helix 53
AF8
C
212 216Right-handed 310
Helix 54
AF9
C
217 231Right-handed alpha
Helix 55
AG1
C
232 234Right-handed 310
Helix 56
AG2
C
237 252Right-handed alpha
Helix 57
AG3
C
252 273Right-handed alpha
Helix 58
AG4
C
276 283Right-handed alpha
Helix 59
AG5
C
286 299Right-handed alpha
Helix 60
AG6
C
304 330Right-handed alpha
Helix 61
AG7
C
338 349Right-handed alpha
Helix 62
AG8
C
362 366Right-handed 310
Helix 63
AG9
C
368 380Right-handed alpha
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There are no sheets in PDB entry 8XDG
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