Analysis of interatomic Contacts of Structural Units in PDB entry:
8XDH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XDH entry

There are 3 chains in PDB entry 8XDH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 28THR 385
B
 ALA 28THR 385
C
 ALA 28THR 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 8XDH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 38Right-handed alpha
Helix 2
AA2
A
41 49Right-handed alpha
Helix 3
AA3
A
52 67Right-handed alpha
Helix 4
AA4
A
68 70Right-handed 310
Helix 5
AA5
A
73 88Right-handed alpha
Helix 6
AA6
A
88 109Right-handed alpha
Helix 7
AA7
A
122 135Right-handed alpha
Helix 8
AA8
A
142 144Right-handed 310
Helix 9
AA9
A
145 168Right-handed alpha
Helix 10
AB1
A
169 171Right-handed 310
Helix 11
AB2
A
176 191Right-handed alpha
Helix 12
AB3
A
212 216Right-handed 310
Helix 13
AB4
A
217 231Right-handed alpha
Helix 14
AB5
A
232 234Right-handed 310
Helix 15
AB6
A
237 252Right-handed alpha
Helix 16
AB7
A
252 273Right-handed alpha
Helix 17
AB8
A
276 282Right-handed alpha
Helix 18
AB9
A
286 297Right-handed alpha
Helix 19
AC1
A
304 330Right-handed alpha
Helix 20
AC2
A
338 351Right-handed alpha
Helix 21
AC3
A
362 366Right-handed 310
Helix 22
AC4
A
368 385Right-handed alpha
Helix 23
AC5
B
29 38Right-handed alpha
Helix 24
AC6
B
41 49Right-handed alpha
Helix 25
AC7
B
52 67Right-handed alpha
Helix 26
AC8
B
68 70Right-handed 310
Helix 27
AC9
B
73 88Right-handed alpha
Helix 28
AD1
B
88 109Right-handed alpha
Helix 29
AD2
B
122 135Right-handed alpha
Helix 30
AD3
B
142 144Right-handed 310
Helix 31
AD4
B
145 168Right-handed alpha
Helix 32
AD5
B
169 171Right-handed 310
Helix 33
AD6
B
176 191Right-handed alpha
Helix 34
AD7
B
212 216Right-handed 310
Helix 35
AD8
B
217 231Right-handed alpha
Helix 36
AD9
B
232 234Right-handed 310
Helix 37
AE1
B
237 252Right-handed alpha
Helix 38
AE2
B
252 273Right-handed alpha
Helix 39
AE3
B
276 282Right-handed alpha
Helix 40
AE4
B
286 297Right-handed alpha
Helix 41
AE5
B
304 330Right-handed alpha
Helix 42
AE6
B
338 351Right-handed alpha
Helix 43
AE7
B
362 366Right-handed 310
Helix 44
AE8
B
368 385Right-handed alpha
Helix 45
AE9
C
29 38Right-handed alpha
Helix 46
AF1
C
41 49Right-handed alpha
Helix 47
AF2
C
52 67Right-handed alpha
Helix 48
AF3
C
68 70Right-handed 310
Helix 49
AF4
C
73 88Right-handed alpha
Helix 50
AF5
C
88 109Right-handed alpha
Helix 51
AF6
C
122 135Right-handed alpha
Helix 52
AF7
C
142 144Right-handed 310
Helix 53
AF8
C
145 168Right-handed alpha
Helix 54
AF9
C
169 171Right-handed 310
Helix 55
AG1
C
176 191Right-handed alpha
Helix 56
AG2
C
212 216Right-handed 310
Helix 57
AG3
C
217 231Right-handed alpha
Helix 58
AG4
C
232 234Right-handed 310
Helix 59
AG5
C
237 252Right-handed alpha
Helix 60
AG6
C
252 273Right-handed alpha
Helix 61
AG7
C
276 282Right-handed alpha
Helix 62
AG8
C
286 297Right-handed alpha
Helix 63
AG9
C
304 330Right-handed alpha
Helix 64
AH1
C
338 351Right-handed alpha
Helix 65
AH2
C
362 366Right-handed 310
Helix 66
AH3
C
368 385Right-handed alpha
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There are no sheets in PDB entry 8XDH
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