Analysis of interatomic Contacts of Structural Units in PDB entry:
8XE8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XE8 entry

There is 1 chain in PDB entry 8XE8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 130GLU 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 8XE8. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
137 152Right-handed alpha
Helix 2
AA2
A
188 200Right-handed alpha
Helix 3
AA3
A
230 237Right-handed alpha
Helix 4
AA4
A
262 267Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8XE8.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
178 184first strand
Strand 2
A
163 169anti-parallel
Strand 3
A
247 252parallel
Strand 4
A
214 217anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il