Analysis of interatomic Contacts of Structural Units in PDB entry:
8XEY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XEY entry

There is 1 chain in PDB entry 8XEY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 403GLN 714
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 8XEY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
408 414Right-handed 310
Helix 2
AA2
A
417 421Right-handed alpha
Helix 3
AA3
A
460 471Right-handed alpha
Helix 4
AA4
A
501 507Right-handed alpha
Helix 5
AA5
A
512 533Right-handed alpha
Helix 6
AA6
A
541 543Right-handed 310
Helix 7
AA7
A
553 555Right-handed 310
Helix 8
AA8
A
570 574Right-handed 310
Helix 9
AA9
A
590 614Right-handed alpha
Helix 10
AB1
A
625 636Right-handed alpha
Helix 11
AB2
A
642 647Right-handed alpha
Helix 12
AB3
A
649 661Right-handed alpha
Helix 13
AB4
A
669 674Right-handed alpha
Helix 14
AB5
A
676 681Right-handed alpha
Helix 15
AB6
A
682 685Right-handed 310
Helix 16
AB7
A
695 711Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 8XEY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
422 430first strand
Strand 2
A
434 441anti-parallel
Strand 3
A
447 454anti-parallel
Strand 4
A
488 494anti-parallel
Strand 5
A
479 484anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
499 500first strand
Strand 2
A
545 547anti-parallel
Strand 3
A
557 559anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
535 536first strand
Strand 2
A
566 567anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il