Analysis of interatomic Contacts of Structural Units in PDB entry:
8XFL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XFL entry

There are 2 chains in PDB entry 8XFL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 51LYS 367
B
 PRO 51LYS 367
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 8XFL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
90 92Right-handed 310
Helix 2
AA2
A
93 110Right-handed alpha
Helix 3
AA3
A
140 147Right-handed alpha
Helix 4
AA4
A
151 171Right-handed alpha
Helix 5
AA5
A
232 249Right-handed alpha
Helix 6
AA6
A
257 268Right-handed alpha
Helix 7
AA7
A
277 288Right-handed alpha
Helix 8
AA8
A
297 302Right-handed alpha
Helix 9
AA9
A
303 304Right-handed 310
Helix 10
AB1
A
305 309Right-handed 310
Helix 11
AB2
A
328 338Right-handed alpha
Helix 12
AB3
A
341 352Right-handed alpha
Helix 13
AB4
A
355 364Right-handed alpha
Helix 14
AB5
B
90 92Right-handed 310
Helix 15
AB6
B
93 110Right-handed alpha
Helix 16
AB7
B
140 147Right-handed alpha
Helix 17
AB8
B
151 171Right-handed alpha
Helix 18
AB9
B
233 249Right-handed alpha
Helix 19
AC1
B
277 288Right-handed alpha
Helix 20
AC2
B
291 295Right-handed 310
Helix 21
AC3
B
297 302Right-handed alpha
Helix 22
AC4
B
303 304Right-handed 310
Helix 23
AC5
B
305 309Right-handed 310
Helix 24
AC6
B
328 339Right-handed alpha
Helix 25
AC7
B
341 352Right-handed alpha
Helix 26
AC8
B
355 364Right-handed alpha
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There are 4 sheets in PDB entry 8XFL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
A
56 64anti-parallel
Strand 3
A
68 75anti-parallel
Strand 4
A
81 88anti-parallel
Strand 5
A
127 132anti-parallel
Strand 6
A
118 123anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 139first strand
Strand 2
A
184 186anti-parallel
Strand 3
A
192 194anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 53first strand
Strand 2
B
56 64anti-parallel
Strand 3
B
68 75anti-parallel
Strand 4
B
81 88anti-parallel
Strand 5
B
127 132anti-parallel
Strand 6
B
118 123anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
184 186first strand
Strand 2
B
192 194anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il