Analysis of interatomic Contacts of Structural Units in PDB entry:
8XFT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XFT entry

There are 4 chains in PDB entry 8XFT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 33THR 820
C
 LYS 56LEU 242
E
 VAL 21SER 549
G
 LYS 41CYS 141
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 8XFT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
169 174Right-handed alpha
Helix 2
AA2
A
242 247Right-handed 310
Helix 3
AA3
A
335 339Right-handed 310
Helix 4
AA4
A
470 474Right-handed 310
Helix 5
AA5
A
538 567Right-handed alpha
Helix 6
AA6
A
571 601Right-handed alpha
Helix 7
AA7
A
605 615Right-handed alpha
Helix 8
AA8
A
615 649Right-handed alpha
Helix 9
AA9
A
658 683Right-handed alpha
Helix 10
AB1
A
694 699Right-handed alpha
Helix 11
AB2
A
703 732Right-handed alpha
Helix 12
AB3
A
740 769Right-handed alpha
Helix 13
AB4
A
778 790Right-handed alpha
Helix 14
AB5
A
791 804Right-handed alpha
Helix 15
AB6
A
805 820Right-handed alpha
Helix 16
AB7
C
138 150Right-handed alpha
Helix 17
AB8
C
163 171Right-handed alpha
Helix 18
AB9
C
172 174Right-handed 310
Helix 19
AC1
C
185 198Right-handed alpha
Helix 20
AC2
C
219 242Right-handed alpha
Helix 21
AC3
E
511 515Right-handed 310
Helix 22
AC4
E
533 537Right-handed 310
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There are 12 sheets in PDB entry 8XFT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 42first strand
Strand 2
A
62 63parallel
Strand 3
A
85 87parallel
Strand 4
A
109 111parallel
Strand 5
A
133 135parallel
Strand 6
A
157 159parallel
Strand 7
A
181 183parallel
Strand 8
A
205 207parallel
Strand 9
A
229 231parallel
Strand 10
A
252 254parallel
Strand 11
A
276 278parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 72first strand
Strand 2
A
95 96parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 192first strand
Strand 2
A
215 216parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 303first strand
Strand 2
A
323 326parallel
Strand 3
A
347 349parallel
Strand 4
A
369 371parallel
Strand 5
A
393 395parallel
Strand 6
A
417 419parallel
Strand 7
A
438 440parallel
Strand 8
A
461 463parallel
Strand 9
A
521 522parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 380first strand
Strand 2
A
403 404parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
94 97first strand
Strand 2
C
202 205anti-parallel
Strand 3
C
58 65anti-parallel
Strand 4
C
77 85anti-parallel
Strand 5
C
180 183anti-parallel
Strand 6
C
153 157parallel
Strand 7
C
121 125parallel
Strand 8
C
99 100parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
23 26first strand
Strand 2
E
444 449anti-parallel
Strand 3
E
502 507anti-parallel
Strand 4
E
492 497anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
482 484first strand
Strand 2
E
470 476anti-parallel
Strand 3
E
459 464anti-parallel
Strand 4
E
516 522anti-parallel
Strand 5
E
539 540anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
482 484first strand
Strand 2
E
470 476anti-parallel
Strand 3
E
459 464anti-parallel
Strand 4
E
516 522anti-parallel
Strand 5
E
544 546anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
69 75first strand
Strand 2
G
60 66anti-parallel
Strand 3
G
91 95parallel
Strand 4
G
82 85anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
101 104first strand
Strand 2
G
110 113anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
118 119first strand
Strand 2
G
124 125anti-parallel
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