Analysis of interatomic Contacts of Structural Units in PDB entry:
8XGQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XGQ entry

There are 2 chains in PDB entry 8XGQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 7HIS 430
A
 SER 7ILE 432
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 8XGQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
31 42Right-handed alpha
Helix 2
AA2
B
58 60Right-handed 310
Helix 3
AA3
B
61 72Right-handed alpha
Helix 4
AA4
B
82 87Right-handed alpha
Helix 5
AA5
B
98 106Right-handed alpha
Helix 6
AA6
B
115 134Right-handed alpha
Helix 7
AA7
B
184 195Right-handed alpha
Helix 8
AA8
B
200 207Right-handed 310
Helix 9
AA9
B
213 217Right-handed 310
Helix 10
AB1
B
235 240Right-handed alpha
Helix 11
AB2
B
243 251Right-handed alpha
Helix 12
AB3
B
252 254Right-handed 310
Helix 13
AB4
B
368 376Right-handed alpha
Helix 14
AB5
B
378 389Right-handed alpha
Helix 15
AB6
B
410 419Right-handed alpha
Helix 16
AB7
B
422 427Right-handed alpha
Helix 17
AB8
A
31 42Right-handed alpha
Helix 18
AB9
A
58 60Right-handed 310
Helix 19
AC1
A
61 72Right-handed alpha
Helix 20
AC2
A
81 88Right-handed alpha
Helix 21
AC3
A
97 106Right-handed alpha
Helix 22
AC4
A
115 134Right-handed alpha
Helix 23
AC5
A
184 194Right-handed alpha
Helix 24
AC6
A
200 207Right-handed 310
Helix 25
AC7
A
213 217Right-handed 310
Helix 26
AC8
A
235 240Right-handed alpha
Helix 27
AC9
A
243 251Right-handed alpha
Helix 28
AD1
A
252 254Right-handed 310
Helix 29
AD2
A
368 376Right-handed alpha
Helix 30
AD3
A
378 389Right-handed alpha
Helix 31
AD4
A
410 419Right-handed alpha
Helix 32
AD5
A
420 430Right-handed alpha
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There are 7 sheets in PDB entry 8XGQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 80first strand
Strand 2
B
53 57parallel
Strand 3
B
9 12parallel
Strand 4
B
136 140parallel
Strand 5
B
170 177anti-parallel
Strand 6
B
160 163anti-parallel
Strand 7
B
211 212parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 145first strand
Strand 2
B
219 221anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
266 268first strand
Strand 2
B
360 365anti-parallel
Strand 3
B
396 399anti-parallel
Strand 4
B
406 409anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
273 275first strand
Strand 2
B
294 297parallel
Strand 3
B
304 308anti-parallel
Strand 4
B
314 317anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 80first strand
Strand 2
A
53 57parallel
Strand 3
A
9 12parallel
Strand 4
A
136 140parallel
Strand 5
A
170 177anti-parallel
Strand 6
A
160 163anti-parallel
Strand 7
A
211 212parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 145first strand
Strand 2
A
219 221anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 267first strand
Strand 2
A
361 365anti-parallel
Strand 3
A
396 400anti-parallel
Strand 4
A
405 409anti-parallel
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