Analysis of interatomic Contacts of Structural Units in PDB entry:
8XHK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8XHK entry

There are 6 chains in PDB entry 8XHK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	LYS 13	ASP 405
A	VAL 11	ASP 405
B	VAL 11	ASP 405
D	VAL 11	ASP 405
E	LEU 14	VAL 404
F	HIS 16	ASP 405

There are105 helices in PDB entry 8XHK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	14	28	Right-handed alpha
Helix 2	AA2	C	61	64	Right-handed 310
Helix 3	AA3	C	65	80	Right-handed alpha
Helix 4	AA4	C	93	108	Right-handed alpha
Helix 5	AA5	C	116	130	Right-handed alpha
Helix 6	AA6	C	148	153	Right-handed alpha
Helix 7	AA7	C	154	160	Right-handed alpha
Helix 8	AA8	C	171	182	Right-handed alpha
Helix 9	AA9	C	201	213	Right-handed alpha
Helix 10	AB1	C	228	232	Right-handed 310
Helix 11	AB2	C	233	240	Right-handed alpha
Helix 12	AB3	C	271	279	Right-handed alpha
Helix 13	AB4	C	282	287	Right-handed alpha
Helix 14	AB5	C	291	306	Right-handed alpha
Helix 15	AB6	C	308	328	Right-handed alpha
Helix 16	AB7	C	346	360	Right-handed alpha
Helix 17	AB8	C	388	405	Right-handed alpha
Helix 18	AB9	A	14	28	Right-handed alpha
Helix 19	AC1	A	61	64	Right-handed 310
Helix 20	AC2	A	65	80	Right-handed alpha
Helix 21	AC3	A	93	108	Right-handed alpha
Helix 22	AC4	A	116	130	Right-handed alpha
Helix 23	AC5	A	148	153	Right-handed alpha
Helix 24	AC6	A	154	160	Right-handed alpha
Helix 25	AC7	A	171	182	Right-handed alpha
Helix 26	AC8	A	201	213	Right-handed alpha
Helix 27	AC9	A	228	232	Right-handed 310
Helix 28	AD1	A	233	240	Right-handed alpha
Helix 29	AD2	A	271	279	Right-handed alpha
Helix 30	AD3	A	282	287	Right-handed alpha
Helix 31	AD4	A	291	306	Right-handed alpha
Helix 32	AD5	A	308	326	Right-handed alpha
Helix 33	AD6	A	346	359	Right-handed alpha
Helix 34	AD7	A	388	405	Right-handed alpha
Helix 35	AD8	B	12	28	Right-handed alpha
Helix 36	AD9	B	61	64	Right-handed 310
Helix 37	AE1	B	65	80	Right-handed alpha
Helix 38	AE2	B	93	108	Right-handed alpha
Helix 39	AE3	B	116	130	Right-handed alpha
Helix 40	AE4	B	148	153	Right-handed alpha
Helix 41	AE5	B	154	160	Right-handed alpha
Helix 42	AE6	B	171	181	Right-handed alpha
Helix 43	AE7	B	201	213	Right-handed alpha
Helix 44	AE8	B	228	232	Right-handed 310
Helix 45	AE9	B	233	240	Right-handed alpha
Helix 46	AF1	B	271	279	Right-handed alpha
Helix 47	AF2	B	282	287	Right-handed alpha
Helix 48	AF3	B	291	306	Right-handed alpha
Helix 49	AF4	B	308	326	Right-handed alpha
Helix 50	AF5	B	346	360	Right-handed alpha
Helix 51	AF6	B	388	403	Right-handed alpha
Helix 52	AF7	D	14	28	Right-handed alpha
Helix 53	AF8	D	61	64	Right-handed 310
Helix 54	AF9	D	65	80	Right-handed alpha
Helix 55	AG1	D	93	108	Right-handed alpha
Helix 56	AG2	D	116	131	Right-handed alpha
Helix 57	AG3	D	148	153	Right-handed alpha
Helix 58	AG4	D	154	160	Right-handed alpha
Helix 59	AG5	D	171	182	Right-handed alpha
Helix 60	AG6	D	201	213	Right-handed alpha
Helix 61	AG7	D	228	232	Right-handed 310
Helix 62	AG8	D	233	240	Right-handed alpha
Helix 63	AG9	D	271	280	Right-handed alpha
Helix 64	AH1	D	282	287	Right-handed alpha
Helix 65	AH2	D	291	307	Right-handed alpha
Helix 66	AH3	D	308	328	Right-handed alpha
Helix 67	AH4	D	346	360	Right-handed alpha
Helix 68	AH5	D	388	402	Right-handed alpha
Helix 69	AH6	D	403	405	Right-handed 310
Helix 70	AH7	E	15	28	Right-handed alpha
Helix 71	AH8	E	61	64	Right-handed 310
Helix 72	AH9	E	65	80	Right-handed alpha
Helix 73	AI1	E	85	89	Right-handed 310
Helix 74	AI2	E	93	108	Right-handed alpha
Helix 75	AI3	E	116	123	Right-handed alpha
Helix 76	AI4	E	124	130	Right-handed alpha
Helix 77	AI5	E	148	153	Right-handed alpha
Helix 78	AI6	E	154	160	Right-handed alpha
Helix 79	AI7	E	171	182	Right-handed alpha
Helix 80	AI8	E	201	213	Right-handed alpha
Helix 81	AI9	E	228	232	Right-handed 310
Helix 82	AJ1	E	233	240	Right-handed alpha
Helix 83	AJ2	E	271	279	Right-handed alpha
Helix 84	AJ3	E	282	287	Right-handed alpha
Helix 85	AJ4	E	291	306	Right-handed alpha
Helix 86	AJ5	E	308	328	Right-handed alpha
Helix 87	AJ6	E	346	360	Right-handed alpha
Helix 88	AJ7	E	388	402	Right-handed alpha
Helix 89	AJ8	F	17	28	Right-handed alpha
Helix 90	AJ9	F	61	64	Right-handed 310
Helix 91	AK1	F	65	80	Right-handed alpha
Helix 92	AK2	F	93	108	Right-handed alpha
Helix 93	AK3	F	116	130	Right-handed alpha
Helix 94	AK4	F	148	153	Right-handed alpha
Helix 95	AK5	F	154	160	Right-handed alpha
Helix 96	AK6	F	171	182	Right-handed alpha
Helix 97	AK7	F	201	213	Right-handed alpha
Helix 98	AK8	F	228	232	Right-handed 310
Helix 99	AK9	F	233	240	Right-handed alpha
Helix 100	AL1	F	271	279	Right-handed alpha
Helix 101	AL2	F	282	287	Right-handed alpha
Helix 102	AL3	F	291	307	Right-handed alpha
Helix 103	AL4	F	308	328	Right-handed alpha
Helix 104	AL5	F	346	360	Right-handed alpha
Helix 105	AL6	F	388	403	Right-handed alpha

There are 18 sheets in PDB entry 8XHK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	36	38	first strand
Strand 2	C	42	44	anti-parallel
Strand 3	C	50	53	anti-parallel
Strand 4	C	362	363	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	114	first strand
Strand 2	C	261	266	anti-parallel
Strand 3	C	246	251	anti-parallel
Strand 4	C	215	219	parallel
Strand 5	C	185	190	parallel
Strand 6	C	140	144	parallel
Strand 7	C	164	167	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	343	first strand
Strand 2	C	378	382	anti-parallel
Strand 3	C	365	367	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	36	38	first strand
Strand 2	A	42	44	anti-parallel
Strand 3	A	50	53	anti-parallel
Strand 4	A	362	363	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	114	first strand
Strand 2	A	261	266	anti-parallel
Strand 3	A	246	251	anti-parallel
Strand 4	A	215	219	parallel
Strand 5	A	185	188	parallel
Strand 6	A	140	144	parallel
Strand 7	A	164	167	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	345	first strand
Strand 2	A	377	382	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	38	first strand
Strand 2	B	42	44	anti-parallel
Strand 3	B	50	53	anti-parallel
Strand 4	B	362	363	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	111	114	first strand
Strand 2	B	261	264	anti-parallel
Strand 3	B	246	251	anti-parallel
Strand 4	B	215	219	parallel
Strand 5	B	185	190	parallel
Strand 6	B	140	144	parallel
Strand 7	B	164	167	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	345	first strand
Strand 2	B	377	382	anti-parallel
Strand 3	B	365	367	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	36	38	first strand
Strand 2	D	42	44	anti-parallel
Strand 3	D	50	53	anti-parallel
Strand 4	D	362	363	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	110	114	first strand
Strand 2	D	261	266	anti-parallel
Strand 3	D	246	251	anti-parallel
Strand 4	D	215	219	parallel
Strand 5	D	185	190	parallel
Strand 6	D	140	144	parallel
Strand 7	D	164	167	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	345	first strand
Strand 2	D	377	382	anti-parallel
Strand 3	D	365	367	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	36	38	first strand
Strand 2	E	42	44	anti-parallel
Strand 3	E	50	53	anti-parallel
Strand 4	E	362	363	parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	111	114	first strand
Strand 2	E	261	264	anti-parallel
Strand 3	E	246	251	anti-parallel
Strand 4	E	215	219	parallel
Strand 5	E	185	190	parallel
Strand 6	E	140	144	parallel
Strand 7	E	164	167	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	339	345	first strand
Strand 2	E	377	382	anti-parallel
Strand 3	E	365	367	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	36	38	first strand
Strand 2	F	42	44	anti-parallel
Strand 3	F	50	53	anti-parallel
Strand 4	F	362	363	parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	110	114	first strand
Strand 2	F	261	266	anti-parallel
Strand 3	F	246	251	anti-parallel
Strand 4	F	215	219	parallel
Strand 5	F	185	190	parallel
Strand 6	F	140	144	parallel
Strand 7	F	164	167	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	339	345	first strand
Strand 2	F	377	382	anti-parallel
Strand 3	F	365	367	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8XHK

Analysis of interatomic Contacts of Structural Units in PDB entry:
8XHK