Analysis of interatomic Contacts of Structural Units in PDB entry:
8XHR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XHR entry

There are 3 chains in PDB entry 8XHR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 4THR 291
B
 PRO 4THR 291
C
 PRO 4THR 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 8XHR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 27Right-handed alpha
Helix 2
AA2
A
29 47Right-handed alpha
Helix 3
AA3
A
61 71Right-handed alpha
Helix 4
AA4
A
88 103Right-handed alpha
Helix 5
AA5
A
164 169Right-handed alpha
Helix 6
AA6
A
181 195Right-handed alpha
Helix 7
AA7
A
206 219Right-handed alpha
Helix 8
AA8
A
220 222Right-handed 310
Helix 9
AA9
A
223 239Right-handed alpha
Helix 10
AB1
A
252 261Right-handed alpha
Helix 11
AB2
A
272 289Right-handed alpha
Helix 12
AB3
B
11 27Right-handed alpha
Helix 13
AB4
B
29 48Right-handed alpha
Helix 14
AB5
B
61 71Right-handed alpha
Helix 15
AB6
B
72 75Right-handed 310
Helix 16
AB7
B
88 103Right-handed alpha
Helix 17
AB8
B
164 170Right-handed 310
Helix 18
AB9
B
181 195Right-handed alpha
Helix 19
AC1
B
205 219Right-handed alpha
Helix 20
AC2
B
220 222Right-handed 310
Helix 21
AC3
B
223 239Right-handed alpha
Helix 22
AC4
B
252 261Right-handed alpha
Helix 23
AC5
B
272 290Right-handed alpha
Helix 24
AC6
C
11 27Right-handed alpha
Helix 25
AC7
C
29 48Right-handed alpha
Helix 26
AC8
C
61 71Right-handed alpha
Helix 27
AC9
C
72 75Right-handed 310
Helix 28
AD1
C
88 103Right-handed alpha
Helix 29
AD2
C
164 169Right-handed alpha
Helix 30
AD3
C
181 195Right-handed alpha
Helix 31
AD4
C
205 219Right-handed alpha
Helix 32
AD5
C
220 222Right-handed 310
Helix 33
AD6
C
223 239Right-handed alpha
Helix 34
AD7
C
252 262Right-handed alpha
Helix 35
AD8
C
272 290Right-handed alpha
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There are 9 sheets in PDB entry 8XHR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
81 85anti-parallel
Strand 3
A
138 149parallel
Strand 4
A
127 135anti-parallel
Strand 5
A
107 111anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
81 85anti-parallel
Strand 3
A
138 149parallel
Strand 4
A
127 135anti-parallel
Strand 5
A
115 116anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 161first strand
Strand 2
A
177 179anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 60first strand
Strand 2
B
81 85anti-parallel
Strand 3
B
138 149parallel
Strand 4
B
127 135anti-parallel
Strand 5
B
107 111anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 60first strand
Strand 2
B
81 85anti-parallel
Strand 3
B
138 149parallel
Strand 4
B
127 135anti-parallel
Strand 5
B
115 116anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 163first strand
Strand 2
B
175 179anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 60first strand
Strand 2
C
81 85anti-parallel
Strand 3
C
138 149parallel
Strand 4
C
127 135anti-parallel
Strand 5
C
107 111anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 60first strand
Strand 2
C
81 85anti-parallel
Strand 3
C
138 149parallel
Strand 4
C
127 135anti-parallel
Strand 5
C
115 116anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
159 163first strand
Strand 2
C
175 179anti-parallel
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