Analysis of interatomic Contacts of Structural Units in PDB entry:
8XHU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8XHU entry

There are 3 chains in PDB entry 8XHU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 30	LEU 406
B	HIS 31	LEU 406
C	HIS 30	LEU 406

There are 54 helices in PDB entry 8XHU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	32	34	Right-handed 310
Helix 2	AA2	A	54	57	Right-handed 310
Helix 3	AA3	A	65	77	Right-handed alpha
Helix 4	AA4	A	87	98	Right-handed alpha
Helix 5	AA5	A	109	119	Right-handed alpha
Helix 6	AA6	A	132	134	Right-handed 310
Helix 7	AA7	A	137	152	Right-handed alpha
Helix 8	AA8	A	174	177	Right-handed 310
Helix 9	AA9	A	189	196	Right-handed alpha
Helix 10	AB1	A	203	212	Right-handed alpha
Helix 11	AB2	A	284	299	Right-handed alpha
Helix 12	AB3	A	302	307	Right-handed alpha
Helix 13	AB4	A	311	315	Right-handed 310
Helix 14	AB5	A	318	333	Right-handed alpha
Helix 15	AB6	A	351	353	Right-handed 310
Helix 16	AB7	A	354	367	Right-handed alpha
Helix 17	AB8	A	369	371	Right-handed 310
Helix 18	AB9	A	383	388	Right-handed alpha
Helix 19	AC1	B	32	34	Right-handed 310
Helix 20	AC2	B	54	57	Right-handed 310
Helix 21	AC3	B	65	77	Right-handed alpha
Helix 22	AC4	B	87	98	Right-handed alpha
Helix 23	AC5	B	109	119	Right-handed alpha
Helix 24	AC6	B	132	134	Right-handed 310
Helix 25	AC7	B	137	152	Right-handed alpha
Helix 26	AC8	B	174	178	Right-handed 310
Helix 27	AC9	B	189	196	Right-handed alpha
Helix 28	AD1	B	203	212	Right-handed alpha
Helix 29	AD2	B	284	299	Right-handed alpha
Helix 30	AD3	B	302	307	Right-handed alpha
Helix 31	AD4	B	311	315	Right-handed 310
Helix 32	AD5	B	318	333	Right-handed alpha
Helix 33	AD6	B	351	353	Right-handed 310
Helix 34	AD7	B	354	367	Right-handed alpha
Helix 35	AD8	B	369	371	Right-handed 310
Helix 36	AD9	B	383	388	Right-handed alpha
Helix 37	AE1	C	32	34	Right-handed 310
Helix 38	AE2	C	54	57	Right-handed 310
Helix 39	AE3	C	65	77	Right-handed alpha
Helix 40	AE4	C	87	98	Right-handed alpha
Helix 41	AE5	C	109	119	Right-handed alpha
Helix 42	AE6	C	132	134	Right-handed 310
Helix 43	AE7	C	137	152	Right-handed alpha
Helix 44	AE8	C	174	178	Right-handed 310
Helix 45	AE9	C	189	196	Right-handed alpha
Helix 46	AF1	C	203	212	Right-handed alpha
Helix 47	AF2	C	284	299	Right-handed alpha
Helix 48	AF3	C	302	307	Right-handed alpha
Helix 49	AF4	C	311	315	Right-handed 310
Helix 50	AF5	C	318	333	Right-handed alpha
Helix 51	AF6	C	351	353	Right-handed 310
Helix 52	AF7	C	354	367	Right-handed alpha
Helix 53	AF8	C	369	371	Right-handed 310
Helix 54	AF9	C	383	388	Right-handed alpha

There are 17 sheets in PDB entry 8XHU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	105	first strand
Strand 2	A	81	86	parallel
Strand 3	A	36	42	parallel
Strand 4	A	125	130	parallel
Strand 5	A	185	188	anti-parallel
Strand 6	A	155	161	anti-parallel
Strand 7	A	179	181	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	105	first strand
Strand 2	A	81	86	parallel
Strand 3	A	36	42	parallel
Strand 4	A	125	130	parallel
Strand 5	A	185	188	anti-parallel
Strand 6	A	155	161	anti-parallel
Strand 7	A	216	220	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	63	64	first strand
Strand 2	A	59	61	anti-parallel
Strand 3	A	242	243	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	167	168	first strand
Strand 2	A	171	172	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	275	277	first strand
Strand 2	A	247	260	anti-parallel
Strand 3	A	391	402	anti-parallel
Strand 4	A	335	345	anti-parallel
Strand 5	A	373	378	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	264	266	first strand
Strand 2	A	269	271	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	105	first strand
Strand 2	B	81	86	parallel
Strand 3	B	36	42	parallel
Strand 4	B	125	130	parallel
Strand 5	B	185	188	anti-parallel
Strand 6	B	155	160	anti-parallel
Strand 7	B	180	181	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	105	first strand
Strand 2	B	81	86	parallel
Strand 3	B	36	42	parallel
Strand 4	B	125	130	parallel
Strand 5	B	185	188	anti-parallel
Strand 6	B	155	160	anti-parallel
Strand 7	B	216	219	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	64	first strand
Strand 2	B	59	61	anti-parallel
Strand 3	B	242	243	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	167	168	first strand
Strand 2	B	171	172	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	276	277	first strand
Strand 2	B	247	259	anti-parallel
Strand 3	B	391	402	anti-parallel
Strand 4	B	335	345	anti-parallel
Strand 5	B	373	378	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	264	266	first strand
Strand 2	B	269	271	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	102	105	first strand
Strand 2	C	81	86	parallel
Strand 3	C	36	42	parallel
Strand 4	C	125	130	parallel
Strand 5	C	185	188	anti-parallel
Strand 6	C	155	160	anti-parallel
Strand 7	C	180	181	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	102	105	first strand
Strand 2	C	81	86	parallel
Strand 3	C	36	42	parallel
Strand 4	C	125	130	parallel
Strand 5	C	185	188	anti-parallel
Strand 6	C	155	160	anti-parallel
Strand 7	C	216	220	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	63	64	first strand
Strand 2	C	59	61	anti-parallel
Strand 3	C	242	243	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	275	278	first strand
Strand 2	C	247	260	anti-parallel
Strand 3	C	391	402	anti-parallel
Strand 4	C	335	345	anti-parallel
Strand 5	C	373	378	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	264	266	first strand
Strand 2	C	269	271	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8XHU

Analysis of interatomic Contacts of Structural Units in PDB entry:
8XHU