Analysis of interatomic Contacts of Structural Units in PDB entry:
8XHV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XHV entry

There are 2 chains in PDB entry 8XHV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 737
B
 T 1 T 18
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 8XHV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 48Right-handed alpha
Helix 2
AA2
A
84 108Right-handed alpha
Helix 3
AA3
A
159 166Right-handed alpha
Helix 4
AA4
A
207 216Right-handed alpha
Helix 5
AA5
A
257 268Right-handed alpha
Helix 6
AA6
A
271 288Right-handed alpha
Helix 7
AA7
A
301 306Right-handed alpha
Helix 8
AA8
A
325 332Right-handed alpha
Helix 9
AA9
A
349 356Right-handed alpha
Helix 10
AB1
A
358 375Right-handed alpha
Helix 11
AB2
A
394 399Right-handed alpha
Helix 12
AB3
A
400 405Right-handed alpha
Helix 13
AB4
A
406 409Right-handed 310
Helix 14
AB5
A
422 428Right-handed alpha
Helix 15
AB6
A
432 445Right-handed alpha
Helix 16
AB7
A
453 467Right-handed alpha
Helix 17
AB8
A
476 489Right-handed alpha
Helix 18
AB9
A
491 507Right-handed alpha
Helix 19
AC1
A
565 585Right-handed alpha
Helix 20
AC2
A
602 613Right-handed alpha
Helix 21
AC3
A
681 692Right-handed alpha
Helix 22
AC4
A
693 695Right-handed 310
Helix 23
AC5
A
706 721Right-handed alpha
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There are 7 sheets in PDB entry 8XHV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
630 634anti-parallel
Strand 3
A
639 641anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 9first strand
Strand 2
A
144 156anti-parallel
Strand 3
A
127 139anti-parallel
Strand 4
A
116 123anti-parallel
Strand 5
A
110 111anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 53first strand
Strand 2
A
57 60anti-parallel
Strand 3
A
19 23anti-parallel
Strand 4
A
74 78anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 243first strand
Strand 2
A
230 233anti-parallel
Strand 3
A
183 193anti-parallel
Strand 4
A
175 180anti-parallel
Strand 5
A
247 249anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
308 311first strand
Strand 2
A
646 650anti-parallel
Strand 3
A
653 657anti-parallel
Strand 4
A
671 675anti-parallel
Strand 5
A
616 623anti-parallel
Strand 6
A
590 596parallel
Strand 7
A
522 528parallel
Strand 8
A
537 539anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 323first strand
Strand 2
A
317 318anti-parallel
Strand 3
A
513 514anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
378 382first strand
Strand 2
A
339 347parallel
Strand 3
A
416 420parallel
Strand 4
A
449 452parallel
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