Analysis of interatomic Contacts of Structural Units in PDB entry:
8XJ7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8XJ7 entry

There are 7 chains in PDB entry 8XJ7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 324	LEU 700
B	ASN 324	ILE 782
C	ASN 324	ILE 782
D	ASN 324	ILE 782
E	ASN 324	VAL 707
F	ASN 324	ILE 693
X	T 1	T 6

There are118 helices in PDB entry 8XJ7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	324	336	Right-handed alpha
Helix 2	AA2	A	362	371	Right-handed alpha
Helix 3	AA3	A	372	374	Right-handed 310
Helix 4	AA4	A	376	381	Right-handed alpha
Helix 5	AA5	A	382	384	Right-handed 310
Helix 6	AA6	A	385	400	Right-handed alpha
Helix 7	AA7	A	430	435	Right-handed alpha
Helix 8	AA8	A	455	469	Right-handed alpha
Helix 9	AA9	A	475	489	Right-handed alpha
Helix 10	AB1	A	508	521	Right-handed alpha
Helix 11	AB2	A	529	534	Right-handed alpha
Helix 12	AB3	A	541	546	Right-handed alpha
Helix 13	AB4	A	570	579	Right-handed alpha
Helix 14	AB5	A	617	619	Right-handed 310
Helix 15	AB6	A	638	642	Right-handed 310
Helix 16	AB7	A	652	654	Right-handed 310
Helix 17	AB8	A	655	661	Right-handed alpha
Helix 18	AB9	A	664	680	Right-handed alpha
Helix 19	AC1	A	695	700	Right-handed alpha
Helix 20	AC2	B	325	336	Right-handed alpha
Helix 21	AC3	B	362	371	Right-handed alpha
Helix 22	AC4	B	372	375	Right-handed 310
Helix 23	AC5	B	376	381	Right-handed alpha
Helix 24	AC6	B	382	384	Right-handed 310
Helix 25	AC7	B	385	400	Right-handed alpha
Helix 26	AC8	B	430	435	Right-handed alpha
Helix 27	AC9	B	455	469	Right-handed alpha
Helix 28	AD1	B	476	488	Right-handed alpha
Helix 29	AD2	B	489	491	Right-handed 310
Helix 30	AD3	B	508	521	Right-handed alpha
Helix 31	AD4	B	529	534	Right-handed alpha
Helix 32	AD5	B	541	546	Right-handed alpha
Helix 33	AD6	B	570	579	Right-handed alpha
Helix 34	AD7	B	636	641	Right-handed alpha
Helix 35	AD8	B	654	661	Right-handed alpha
Helix 36	AD9	B	664	680	Right-handed alpha
Helix 37	AE1	B	693	695	Right-handed 310
Helix 38	AE2	B	696	705	Right-handed alpha
Helix 39	AE3	B	714	719	Right-handed 310
Helix 40	AE4	B	735	744	Right-handed alpha
Helix 41	AE5	B	748	763	Right-handed alpha
Helix 42	AE6	C	325	335	Right-handed alpha
Helix 43	AE7	C	363	371	Right-handed alpha
Helix 44	AE8	C	372	375	Right-handed 310
Helix 45	AE9	C	376	381	Right-handed alpha
Helix 46	AF1	C	382	384	Right-handed 310
Helix 47	AF2	C	385	400	Right-handed alpha
Helix 48	AF3	C	430	435	Right-handed alpha
Helix 49	AF4	C	455	469	Right-handed alpha
Helix 50	AF5	C	476	488	Right-handed alpha
Helix 51	AF6	C	489	491	Right-handed 310
Helix 52	AF7	C	508	521	Right-handed alpha
Helix 53	AF8	C	529	534	Right-handed alpha
Helix 54	AF9	C	541	546	Right-handed alpha
Helix 55	AG1	C	571	577	Right-handed alpha
Helix 56	AG2	C	614	619	Right-handed alpha
Helix 57	AG3	C	635	641	Right-handed alpha
Helix 58	AG4	C	654	661	Right-handed alpha
Helix 59	AG5	C	664	680	Right-handed alpha
Helix 60	AG6	C	693	695	Right-handed 310
Helix 61	AG7	C	696	705	Right-handed alpha
Helix 62	AG8	C	710	714	Right-handed 310
Helix 63	AG9	C	716	723	Right-handed alpha
Helix 64	AH1	C	735	744	Right-handed alpha
Helix 65	AH2	C	748	764	Right-handed alpha
Helix 66	AH3	D	325	335	Right-handed alpha
Helix 67	AH4	D	363	371	Right-handed alpha
Helix 68	AH5	D	372	374	Right-handed 310
Helix 69	AH6	D	376	381	Right-handed alpha
Helix 70	AH7	D	382	384	Right-handed 310
Helix 71	AH8	D	385	400	Right-handed alpha
Helix 72	AH9	D	430	434	Right-handed 310
Helix 73	AI1	D	454	469	Right-handed alpha
Helix 74	AI2	D	475	489	Right-handed alpha
Helix 75	AI3	D	508	521	Right-handed alpha
Helix 76	AI4	D	529	534	Right-handed alpha
Helix 77	AI5	D	541	546	Right-handed alpha
Helix 78	AI6	D	570	577	Right-handed alpha
Helix 79	AI7	D	654	659	Right-handed alpha
Helix 80	AI8	D	666	680	Right-handed alpha
Helix 81	AI9	D	693	695	Right-handed 310
Helix 82	AJ1	D	696	704	Right-handed alpha
Helix 83	AJ2	D	716	722	Right-handed alpha
Helix 84	AJ3	D	735	745	Right-handed alpha
Helix 85	AJ4	D	748	753	Right-handed alpha
Helix 86	AJ5	D	758	763	Right-handed alpha
Helix 87	AJ6	E	325	335	Right-handed alpha
Helix 88	AJ7	E	363	371	Right-handed alpha
Helix 89	AJ8	E	372	375	Right-handed 310
Helix 90	AJ9	E	376	381	Right-handed alpha
Helix 91	AK1	E	382	384	Right-handed 310
Helix 92	AK2	E	385	400	Right-handed alpha
Helix 93	AK3	E	430	436	Right-handed 310
Helix 94	AK4	E	454	469	Right-handed alpha
Helix 95	AK5	E	476	488	Right-handed alpha
Helix 96	AK6	E	509	521	Right-handed alpha
Helix 97	AK7	E	529	534	Right-handed alpha
Helix 98	AK8	E	570	577	Right-handed alpha
Helix 99	AK9	E	632	634	Right-handed 310
Helix 100	AL1	E	635	641	Right-handed alpha
Helix 101	AL2	E	655	659	Right-handed 310
Helix 102	AL3	E	664	680	Right-handed alpha
Helix 103	AL4	E	695	704	Right-handed alpha
Helix 104	AL5	F	325	335	Right-handed alpha
Helix 105	AL6	F	362	372	Right-handed alpha
Helix 106	AL7	F	373	375	Right-handed 310
Helix 107	AL8	F	376	381	Right-handed alpha
Helix 108	AL9	F	382	384	Right-handed 310
Helix 109	AM1	F	385	400	Right-handed alpha
Helix 110	AM2	F	430	434	Right-handed 310
Helix 111	AM3	F	454	469	Right-handed alpha
Helix 112	AM4	F	478	488	Right-handed alpha
Helix 113	AM5	F	509	521	Right-handed alpha
Helix 114	AM6	F	544	548	Right-handed 310
Helix 115	AM7	F	570	579	Right-handed alpha
Helix 116	AM8	F	614	619	Right-handed 310
Helix 117	AM9	F	654	659	Right-handed alpha
Helix 118	AN1	F	664	680	Right-handed alpha

There are 33 sheets in PDB entry 8XJ7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	341	first strand
Strand 2	A	347	350	anti-parallel
Strand 3	A	355	356	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	412	415	first strand
Strand 2	A	418	421	anti-parallel
Strand 3	A	427	428	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	524	526	first strand
Strand 2	A	552	555	parallel
Strand 3	A	599	604	parallel
Strand 4	A	498	503	parallel
Strand 5	A	621	626	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	581	583	first strand
Strand 2	A	593	595	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	628	631	first strand
Strand 2	A	647	650	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	341	first strand
Strand 2	B	347	350	anti-parallel
Strand 3	B	355	356	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	412	414	first strand
Strand 2	B	419	421	anti-parallel
Strand 3	B	427	428	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	524	526	first strand
Strand 2	B	552	556	parallel
Strand 3	B	599	604	parallel
Strand 4	B	498	503	parallel
Strand 5	B	621	626	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	581	583	first strand
Strand 2	B	593	595	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	628	631	first strand
Strand 2	B	647	650	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	706	707	first strand
Strand 2	B	777	778	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	341	first strand
Strand 2	C	347	350	anti-parallel
Strand 3	C	355	356	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	412	414	first strand
Strand 2	C	419	421	anti-parallel
Strand 3	C	427	428	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	524	526	first strand
Strand 2	C	552	556	parallel
Strand 3	C	599	604	parallel
Strand 4	C	498	503	parallel
Strand 5	C	621	626	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	581	583	first strand
Strand 2	C	593	595	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	628	631	first strand
Strand 2	C	647	650	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	706	708	first strand
Strand 2	C	776	778	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	726	728	first strand
Strand 2	C	731	733	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	341	first strand
Strand 2	D	347	350	anti-parallel
Strand 3	D	355	356	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	412	414	first strand
Strand 2	D	419	421	anti-parallel
Strand 3	D	427	428	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	524	527	first strand
Strand 2	D	552	556	parallel
Strand 3	D	599	604	parallel
Strand 4	D	498	503	parallel
Strand 5	D	621	626	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	581	583	first strand
Strand 2	D	593	595	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	629	631	first strand
Strand 2	D	648	650	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	706	707	first strand
Strand 2	D	777	778	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	726	728	first strand
Strand 2	D	731	733	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	339	341	first strand
Strand 2	E	347	350	anti-parallel
Strand 3	E	355	357	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	412	415	first strand
Strand 2	E	418	421	anti-parallel
Strand 3	E	426	428	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	524	527	first strand
Strand 2	E	552	555	parallel
Strand 3	E	599	604	parallel
Strand 4	E	498	502	parallel
Strand 5	E	621	625	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	628	631	first strand
Strand 2	E	647	650	parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	339	341	first strand
Strand 2	F	347	351	anti-parallel
Strand 3	F	354	358	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	412	415	first strand
Strand 2	F	418	421	anti-parallel
Strand 3	F	427	428	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	524	527	first strand
Strand 2	F	552	555	parallel
Strand 3	F	599	604	parallel
Strand 4	F	498	502	parallel
Strand 5	F	621	625	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	628	631	first strand
Strand 2	F	647	650	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8XJ7

Analysis of interatomic Contacts of Structural Units in PDB entry:
8XJ7