Analysis of interatomic Contacts of Structural Units in PDB entry:
8XJP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XJP entry

There is 1 chain in PDB entry 8XJP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3GLU 295
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8XJP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 8Right-handed 310
Helix 2
AA2
A
21 25Right-handed 310
Helix 3
AA3
A
28 33Right-handed alpha
Helix 4
AA4
A
50 63Right-handed alpha
Helix 5
AA5
A
66 71Right-handed 310
Helix 6
AA6
A
74 79Right-handed alpha
Helix 7
AA7
A
92 99Right-handed alpha
Helix 8
AA8
A
111 115Right-handed 310
Helix 9
AA9
A
116 122Right-handed alpha
Helix 10
AB1
A
132 147Right-handed alpha
Helix 11
AB2
A
155 165Right-handed alpha
Helix 12
AB3
A
172 184Right-handed alpha
Helix 13
AB4
A
185 187Right-handed 310
Helix 14
AB5
A
194 200Right-handed alpha
Helix 15
AB6
A
200 212Right-handed alpha
Helix 16
AB7
A
217 228Right-handed alpha
Helix 17
AB8
A
229 236Right-handed alpha
Helix 18
AB9
A
263 268Right-handed 310
Helix 19
AC1
A
270 286Right-handed alpha
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There are 2 sheets in PDB entry 8XJP. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
A
18 20anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 108first strand
Strand 2
A
41 45parallel
Strand 3
A
125 130parallel
Strand 4
A
189 193parallel
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