Analysis of interatomic Contacts of Structural Units in PDB entry:
8XKW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XKW entry

There are 10 chains in PDB entry 8XKW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 86ASP 135
C
 GLU 13TRP 49
D
 PHE 27LEU 61
E
 GLU 15VAL 60
A
 HIS 49GLY 373
G
 SER 86ASP 135
H
 GLU 13TRP 49
I
 PHE 27LEU 61
J
 GLU 15VAL 60
F
 HIS 49GLY 373
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 8XKW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
86 135Right-handed alpha
Helix 2
AA2
C
14 49Right-handed alpha
Helix 3
AA3
D
30 51Right-handed alpha
Helix 4
AA4
D
51 58Right-handed alpha
Helix 5
AA5
E
16 44Right-handed alpha
Helix 6
AA6
E
49 55Right-handed alpha
Helix 7
AA7
A
50 54Right-handed alpha
Helix 8
AA8
A
63 66Right-handed 310
Helix 9
AA9
A
67 72Right-handed alpha
Helix 10
AB1
A
134 136Right-handed 310
Helix 11
AB2
A
364 373Right-handed alpha
Helix 12
AB3
G
87 135Right-handed alpha
Helix 13
AB4
H
14 49Right-handed alpha
Helix 14
AB5
I
30 51Right-handed alpha
Helix 15
AB6
I
51 58Right-handed alpha
Helix 16
AB7
J
16 44Right-handed alpha
Helix 17
AB8
J
49 55Right-handed alpha
Helix 18
AB9
F
50 54Right-handed alpha
Helix 19
AC1
F
63 66Right-handed 310
Helix 20
AC2
F
67 72Right-handed alpha
Helix 21
AC3
F
134 136Right-handed 310
Helix 22
AC4
F
364 373Right-handed alpha
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There are 2 sheets in PDB entry 8XKW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 20 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 93first strand
Strand 2
A
97 105anti-parallel
Strand 3
A
115 121anti-parallel
Strand 4
A
125 132anti-parallel
Strand 5
A
137 143anti-parallel
Strand 6
A
149 157anti-parallel
Strand 7
A
164 172anti-parallel
Strand 8
A
176 187anti-parallel
Strand 9
A
193 206anti-parallel
Strand 10
A
209 217anti-parallel
Strand 11
A
228 237anti-parallel
Strand 12
A
243 250anti-parallel
Strand 13
A
254 262anti-parallel
Strand 14
A
267 274anti-parallel
Strand 15
A
301 308anti-parallel
Strand 16
A
312 319anti-parallel
Strand 17
A
323 330anti-parallel
Strand 18
A
338 345anti-parallel
Strand 19
A
350 357anti-parallel
Strand 20
A
85 93parallel
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There are 20 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
85 93first strand
Strand 2
F
97 105anti-parallel
Strand 3
F
115 121anti-parallel
Strand 4
F
125 132anti-parallel
Strand 5
F
137 143anti-parallel
Strand 6
F
149 157anti-parallel
Strand 7
F
164 172anti-parallel
Strand 8
F
176 187anti-parallel
Strand 9
F
193 206anti-parallel
Strand 10
F
209 217anti-parallel
Strand 11
F
228 237anti-parallel
Strand 12
F
243 250anti-parallel
Strand 13
F
254 262anti-parallel
Strand 14
F
267 274anti-parallel
Strand 15
F
301 308anti-parallel
Strand 16
F
312 319anti-parallel
Strand 17
F
323 330anti-parallel
Strand 18
F
338 345anti-parallel
Strand 19
F
350 357anti-parallel
Strand 20
F
85 93parallel
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