Analysis of interatomic Contacts of Structural Units in PDB entry:
8XKY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XKY entry

There are 10 chains in PDB entry 8XKY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 86ASP 135
C
 GLU 13TRP 49
D
 PHE 27LEU 61
E
 SER 6VAL 60
A
 HIS 49GLY 373
G
 SER 86ASP 135
H
 GLU 13TRP 49
I
 PHE 27LEU 61
J
 SER 6VAL 60
F
 HIS 49GLY 373
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8XKY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
86 135Right-handed alpha
Helix 2
AA2
C
14 49Right-handed alpha
Helix 3
AA3
D
30 50Right-handed alpha
Helix 4
AA4
D
51 58Right-handed alpha
Helix 5
AA5
E
11 44Right-handed alpha
Helix 6
AA6
E
49 55Right-handed alpha
Helix 7
AA7
A
50 56Right-handed 310
Helix 8
AA8
A
63 66Right-handed 310
Helix 9
AA9
A
67 72Right-handed alpha
Helix 10
AB1
A
364 373Right-handed alpha
Helix 11
AB2
G
87 135Right-handed alpha
Helix 12
AB3
H
14 49Right-handed alpha
Helix 13
AB4
I
30 50Right-handed alpha
Helix 14
AB5
I
51 58Right-handed alpha
Helix 15
AB6
J
11 44Right-handed alpha
Helix 16
AB7
J
49 55Right-handed alpha
Helix 17
AB8
F
50 56Right-handed 310
Helix 18
AB9
F
63 66Right-handed 310
Helix 19
AC1
F
67 72Right-handed alpha
Helix 20
AC2
F
364 373Right-handed alpha
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There are 2 sheets in PDB entry 8XKY. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 20 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 355first strand
Strand 2
A
338 345anti-parallel
Strand 3
A
323 330anti-parallel
Strand 4
A
312 319anti-parallel
Strand 5
A
301 308anti-parallel
Strand 6
A
267 275anti-parallel
Strand 7
A
255 262anti-parallel
Strand 8
A
243 249anti-parallel
Strand 9
A
228 237anti-parallel
Strand 10
A
209 217anti-parallel
Strand 11
A
193 206anti-parallel
Strand 12
A
176 187anti-parallel
Strand 13
A
164 172anti-parallel
Strand 14
A
149 158anti-parallel
Strand 15
A
136 143anti-parallel
Strand 16
A
125 132anti-parallel
Strand 17
A
115 121anti-parallel
Strand 18
A
97 106anti-parallel
Strand 19
A
84 93anti-parallel
Strand 20
A
359 362parallel
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There are 20 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
351 355first strand
Strand 2
F
338 345anti-parallel
Strand 3
F
323 330anti-parallel
Strand 4
F
312 319anti-parallel
Strand 5
F
301 308anti-parallel
Strand 6
F
267 275anti-parallel
Strand 7
F
255 262anti-parallel
Strand 8
F
243 249anti-parallel
Strand 9
F
228 237anti-parallel
Strand 10
F
209 217anti-parallel
Strand 11
F
193 206anti-parallel
Strand 12
F
176 187anti-parallel
Strand 13
F
164 172anti-parallel
Strand 14
F
149 158anti-parallel
Strand 15
F
136 143anti-parallel
Strand 16
F
125 132anti-parallel
Strand 17
F
115 121anti-parallel
Strand 18
F
97 106anti-parallel
Strand 19
F
84 93anti-parallel
Strand 20
F
359 362parallel
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