Analysis of interatomic Contacts of Structural Units in PDB entry:
8XKZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8XKZ entry

There are 2 chains in PDB entry 8XKZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	ARG 98	ILE 2337
D	ARG 98	ILE 2337

There are169 helices in PDB entry 8XKZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	104	113	Right-handed alpha
Helix 2	AA2	C	127	146	Right-handed alpha
Helix 3	AA3	C	158	164	Right-handed alpha
Helix 4	AA4	C	166	172	Right-handed alpha
Helix 5	AA5	C	182	187	Right-handed alpha
Helix 6	AA6	C	189	200	Right-handed alpha
Helix 7	AA7	C	216	224	Right-handed alpha
Helix 8	AA8	C	233	240	Right-handed alpha
Helix 9	AA9	C	242	250	Right-handed alpha
Helix 10	AB1	C	251	253	Right-handed 310
Helix 11	AB2	C	282	289	Right-handed alpha
Helix 12	AB3	C	297	305	Right-handed alpha
Helix 13	AB4	C	329	341	Right-handed alpha
Helix 14	AB5	C	397	416	Right-handed alpha
Helix 15	AB6	C	446	452	Right-handed alpha
Helix 16	AB7	C	456	466	Right-handed alpha
Helix 17	AB8	C	469	472	Right-handed 310
Helix 18	AB9	C	473	480	Right-handed alpha
Helix 19	AC1	C	566	581	Right-handed alpha
Helix 20	AC2	C	591	599	Right-handed alpha
Helix 21	AC3	C	600	605	Right-handed alpha
Helix 22	AC4	C	611	619	Right-handed alpha
Helix 23	AC5	C	627	657	Right-handed alpha
Helix 24	AC6	C	849	865	Right-handed alpha
Helix 25	AC7	C	877	890	Right-handed alpha
Helix 26	AC8	C	893	905	Right-handed alpha
Helix 27	AC9	C	911	928	Right-handed alpha
Helix 28	AD1	C	937	952	Right-handed alpha
Helix 29	AD2	C	958	965	Right-handed alpha
Helix 30	AD3	C	965	975	Right-handed alpha
Helix 31	AD4	C	977	999	Right-handed alpha
Helix 32	AD5	C	1005	1017	Right-handed alpha
Helix 33	AD6	C	1021	1033	Right-handed alpha
Helix 34	AD7	C	1033	1047	Right-handed alpha
Helix 35	AD8	C	1058	1067	Right-handed alpha
Helix 36	AD9	C	1071	1073	Right-handed 310
Helix 37	AE1	C	1074	1088	Right-handed alpha
Helix 38	AE2	C	1093	1107	Right-handed alpha
Helix 39	AE3	C	1115	1125	Right-handed alpha
Helix 40	AE4	C	1133	1137	Right-handed 310
Helix 41	AE5	C	1144	1158	Right-handed alpha
Helix 42	AE6	C	1242	1248	Right-handed alpha
Helix 43	AE7	C	1248	1253	Right-handed alpha
Helix 44	AE8	C	1300	1315	Right-handed alpha
Helix 45	AE9	C	1316	1321	Right-handed alpha
Helix 46	AF1	C	1374	1378	Right-handed 310
Helix 47	AF2	C	1382	1387	Right-handed 310
Helix 48	AF3	C	1438	1463	Right-handed alpha
Helix 49	AF4	C	1484	1499	Right-handed alpha
Helix 50	AF5	C	1499	1506	Right-handed alpha
Helix 51	AF6	C	1586	1593	Right-handed alpha
Helix 52	AF7	C	1597	1599	Right-handed 310
Helix 53	AF8	C	1600	1616	Right-handed alpha
Helix 54	AF9	C	1617	1619	Right-handed 310
Helix 55	AG1	C	1627	1630	Right-handed 310
Helix 56	AG2	C	1692	1710	Right-handed alpha
Helix 57	AG3	C	1727	1732	Right-handed alpha
Helix 58	AG4	C	1743	1746	Right-handed 310
Helix 59	AG5	C	1754	1759	Right-handed alpha
Helix 60	AG6	C	1794	1811	Right-handed alpha
Helix 61	AG7	C	1826	1834	Right-handed alpha
Helix 62	AG8	C	1850	1859	Right-handed alpha
Helix 63	AG9	C	1866	1871	Right-handed alpha
Helix 64	AH1	C	1871	1876	Right-handed alpha
Helix 65	AH2	C	1887	1900	Right-handed alpha
Helix 66	AH3	C	1933	1939	Right-handed alpha
Helix 67	AH4	C	2019	2037	Right-handed alpha
Helix 68	AH5	C	2052	2058	Right-handed alpha
Helix 69	AH6	C	2059	2072	Right-handed alpha
Helix 70	AH7	C	2090	2095	Right-handed alpha
Helix 71	AH8	C	2119	2128	Right-handed alpha
Helix 72	AH9	C	2129	2138	Right-handed alpha
Helix 73	AI1	C	2141	2152	Right-handed alpha
Helix 74	AI2	C	2157	2175	Right-handed alpha
Helix 75	AI3	C	2175	2189	Right-handed alpha
Helix 76	AI4	C	2192	2200	Right-handed alpha
Helix 77	AI5	C	2210	2236	Right-handed alpha
Helix 78	AI6	C	2240	2257	Right-handed alpha
Helix 79	AI7	C	2258	2263	Right-handed 310
Helix 80	AI8	C	2266	2280	Right-handed alpha
Helix 81	AI9	C	2286	2311	Right-handed alpha
Helix 82	AJ1	C	2314	2319	Right-handed alpha
Helix 83	AJ2	C	2320	2324	Right-handed 310
Helix 84	AJ3	C	2327	2337	Right-handed alpha
Helix 85	AJ4	D	104	113	Right-handed alpha
Helix 86	AJ5	D	127	146	Right-handed alpha
Helix 87	AJ6	D	158	164	Right-handed alpha
Helix 88	AJ7	D	166	172	Right-handed alpha
Helix 89	AJ8	D	182	187	Right-handed alpha
Helix 90	AJ9	D	189	200	Right-handed alpha
Helix 91	AK1	D	216	224	Right-handed alpha
Helix 92	AK2	D	233	240	Right-handed alpha
Helix 93	AK3	D	242	250	Right-handed alpha
Helix 94	AK4	D	251	253	Right-handed 310
Helix 95	AK5	D	282	289	Right-handed alpha
Helix 96	AK6	D	297	305	Right-handed alpha
Helix 97	AK7	D	329	341	Right-handed alpha
Helix 98	AK8	D	397	416	Right-handed alpha
Helix 99	AK9	D	446	454	Right-handed alpha
Helix 100	AL1	D	456	466	Right-handed alpha
Helix 101	AL2	D	469	472	Right-handed 310
Helix 102	AL3	D	473	480	Right-handed alpha
Helix 103	AL4	D	566	581	Right-handed alpha
Helix 104	AL5	D	591	599	Right-handed alpha
Helix 105	AL6	D	600	605	Right-handed alpha
Helix 106	AL7	D	611	619	Right-handed alpha
Helix 107	AL8	D	627	657	Right-handed alpha
Helix 108	AL9	D	849	865	Right-handed alpha
Helix 109	AM1	D	877	890	Right-handed alpha
Helix 110	AM2	D	893	905	Right-handed alpha
Helix 111	AM3	D	911	928	Right-handed alpha
Helix 112	AM4	D	937	952	Right-handed alpha
Helix 113	AM5	D	958	965	Right-handed alpha
Helix 114	AM6	D	965	975	Right-handed alpha
Helix 115	AM7	D	977	999	Right-handed alpha
Helix 116	AM8	D	1005	1017	Right-handed alpha
Helix 117	AM9	D	1021	1033	Right-handed alpha
Helix 118	AN1	D	1033	1047	Right-handed alpha
Helix 119	AN2	D	1058	1067	Right-handed alpha
Helix 120	AN3	D	1071	1073	Right-handed 310
Helix 121	AN4	D	1074	1088	Right-handed alpha
Helix 122	AN5	D	1093	1107	Right-handed alpha
Helix 123	AN6	D	1115	1125	Right-handed alpha
Helix 124	AN7	D	1133	1137	Right-handed 310
Helix 125	AN8	D	1144	1158	Right-handed alpha
Helix 126	AN9	D	1242	1248	Right-handed alpha
Helix 127	AO1	D	1248	1253	Right-handed alpha
Helix 128	AO2	D	1300	1315	Right-handed alpha
Helix 129	AO3	D	1316	1321	Right-handed alpha
Helix 130	AO4	D	1374	1378	Right-handed 310
Helix 131	AO5	D	1382	1387	Right-handed 310
Helix 132	AO6	D	1438	1463	Right-handed alpha
Helix 133	AO7	D	1484	1499	Right-handed alpha
Helix 134	AO8	D	1499	1506	Right-handed alpha
Helix 135	AO9	D	1586	1593	Right-handed alpha
Helix 136	AP1	D	1597	1599	Right-handed 310
Helix 137	AP2	D	1600	1616	Right-handed alpha
Helix 138	AP3	D	1617	1619	Right-handed 310
Helix 139	AP4	D	1627	1630	Right-handed 310
Helix 140	AP5	D	1692	1710	Right-handed alpha
Helix 141	AP6	D	1727	1732	Right-handed alpha
Helix 142	AP7	D	1743	1746	Right-handed 310
Helix 143	AP8	D	1754	1759	Right-handed alpha
Helix 144	AP9	D	1760	1765	Right-handed 310
Helix 145	AQ1	D	1794	1811	Right-handed alpha
Helix 146	AQ2	D	1826	1834	Right-handed alpha
Helix 147	AQ3	D	1850	1859	Right-handed alpha
Helix 148	AQ4	D	1866	1871	Right-handed alpha
Helix 149	AQ5	D	1871	1876	Right-handed alpha
Helix 150	AQ6	D	1887	1900	Right-handed alpha
Helix 151	AQ7	D	1933	1939	Right-handed alpha
Helix 152	AQ8	D	2019	2037	Right-handed alpha
Helix 153	AQ9	D	2052	2058	Right-handed alpha
Helix 154	AR1	D	2059	2072	Right-handed alpha
Helix 155	AR2	D	2090	2095	Right-handed alpha
Helix 156	AR3	D	2119	2128	Right-handed alpha
Helix 157	AR4	D	2129	2138	Right-handed alpha
Helix 158	AR5	D	2141	2152	Right-handed alpha
Helix 159	AR6	D	2157	2175	Right-handed alpha
Helix 160	AR7	D	2175	2189	Right-handed alpha
Helix 161	AR8	D	2192	2200	Right-handed alpha
Helix 162	AR9	D	2210	2236	Right-handed alpha
Helix 163	AS1	D	2240	2257	Right-handed alpha
Helix 164	AS2	D	2258	2263	Right-handed 310
Helix 165	AS3	D	2266	2280	Right-handed alpha
Helix 166	AS4	D	2286	2311	Right-handed alpha
Helix 167	AS5	D	2314	2319	Right-handed alpha
Helix 168	AS6	D	2320	2324	Right-handed 310
Helix 169	AS7	D	2327	2337	Right-handed alpha

There are 33 sheets in PDB entry 8XKZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	174	177	first strand
Strand 2	C	152	157	parallel
Strand 3	C	120	123	parallel
Strand 4	C	204	206	parallel
Strand 5	C	228	229	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	290	291	first strand
Strand 2	C	346	350	anti-parallel
Strand 3	C	308	316	anti-parallel
Strand 4	C	319	324	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	432	439	first strand
Strand 2	C	419	428	anti-parallel
Strand 3	C	356	364	anti-parallel
Strand 4	C	370	382	anti-parallel
Strand 5	C	385	390	anti-parallel
Strand 6	C	504	510	anti-parallel
Strand 7	C	558	564	anti-parallel
Strand 8	C	537	541	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	548	549	first strand
Strand 2	C	524	530	anti-parallel
Strand 3	C	582	585	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	670	676	first strand
Strand 2	C	679	687	anti-parallel
Strand 3	C	692	697	anti-parallel
Strand 4	C	700	708	anti-parallel
Strand 5	C	714	717	anti-parallel
Strand 6	C	722	729	anti-parallel
Strand 7	C	733	738	anti-parallel
Strand 8	C	741	746	anti-parallel
Strand 9	C	670	676	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	753	755	first strand
Strand 2	C	814	819	anti-parallel
Strand 3	C	797	801	anti-parallel
Strand 4	C	772	773	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	787	792	first strand
Strand 2	C	778	784	anti-parallel
Strand 3	C	760	765	anti-parallel
Strand 4	C	807	809	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1162	1169	first strand
Strand 2	C	1177	1183	anti-parallel
Strand 3	C	1233	1240	anti-parallel
Strand 4	C	1287	1294	parallel
Strand 5	C	1324	1331	parallel
Strand 6	C	1354	1358	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1389	1394	first strand
Strand 2	C	1401	1408	anti-parallel
Strand 3	C	1419	1427	anti-parallel
Strand 4	C	1471	1481	parallel
Strand 5	C	1508	1517	parallel
Strand 6	C	1526	1533	anti-parallel
Strand 7	C	1541	1548	anti-parallel
Strand 8	C	1557	1559	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1645	1648	first strand
Strand 2	C	1632	1639	anti-parallel
Strand 3	C	1659	1666	anti-parallel
Strand 4	C	1675	1682	anti-parallel
Strand 5	C	1713	1717	parallel
Strand 6	C	1816	1820	parallel
Strand 7	C	1838	1841	parallel
Strand 8	C	1883	1885	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1735	1738	first strand
Strand 2	C	1748	1753	anti-parallel
Strand 3	C	1777	1785	anti-parallel
Strand 4	C	1767	1774	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1823	1825	first strand
Strand 2	C	1845	1847	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1940	1942	first strand
Strand 2	C	1950	1952	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1961	1962	first strand
Strand 2	C	1971	1978	anti-parallel
Strand 3	C	1981	1988	anti-parallel
Strand 4	C	2040	2043	parallel
Strand 5	C	2078	2082	parallel
Strand 6	C	2105	2110	parallel
Strand 7	C	2204	2206	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1993	1997	first strand
Strand 2	C	2009	2013	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2086	2089	first strand
Strand 2	C	2113	2116	parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	174	177	first strand
Strand 2	D	152	157	parallel
Strand 3	D	120	123	parallel
Strand 4	D	204	206	parallel
Strand 5	D	228	229	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	290	291	first strand
Strand 2	D	346	350	anti-parallel
Strand 3	D	308	316	anti-parallel
Strand 4	D	319	324	anti-parallel

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There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	432	439	first strand
Strand 2	D	419	428	anti-parallel
Strand 3	D	356	364	anti-parallel
Strand 4	D	370	382	anti-parallel
Strand 5	D	385	390	anti-parallel
Strand 6	D	504	510	anti-parallel
Strand 7	D	558	564	anti-parallel
Strand 8	D	537	541	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	513	514	first strand
Strand 2	D	520	521	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	548	549	first strand
Strand 2	D	524	530	anti-parallel
Strand 3	D	582	585	anti-parallel

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There are 9 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	670	676	first strand
Strand 2	D	679	687	anti-parallel
Strand 3	D	692	697	anti-parallel
Strand 4	D	700	708	anti-parallel
Strand 5	D	714	717	anti-parallel
Strand 6	D	722	729	anti-parallel
Strand 7	D	733	738	anti-parallel
Strand 8	D	741	746	anti-parallel
Strand 9	D	670	676	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	753	755	first strand
Strand 2	D	814	819	anti-parallel
Strand 3	D	797	801	anti-parallel
Strand 4	D	772	773	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	787	792	first strand
Strand 2	D	778	784	anti-parallel
Strand 3	D	760	765	anti-parallel
Strand 4	D	807	809	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1162	1169	first strand
Strand 2	D	1177	1183	anti-parallel
Strand 3	D	1233	1240	anti-parallel
Strand 4	D	1287	1294	parallel
Strand 5	D	1324	1331	parallel
Strand 6	D	1354	1358	anti-parallel

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There are 8 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1389	1394	first strand
Strand 2	D	1401	1408	anti-parallel
Strand 3	D	1419	1427	anti-parallel
Strand 4	D	1471	1481	parallel
Strand 5	D	1508	1517	parallel
Strand 6	D	1526	1533	anti-parallel
Strand 7	D	1541	1548	anti-parallel
Strand 8	D	1557	1559	anti-parallel

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There are 8 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1645	1648	first strand
Strand 2	D	1632	1639	anti-parallel
Strand 3	D	1659	1666	anti-parallel
Strand 4	D	1675	1682	anti-parallel
Strand 5	D	1713	1717	parallel
Strand 6	D	1816	1820	parallel
Strand 7	D	1838	1841	parallel
Strand 8	D	1883	1885	parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1735	1738	first strand
Strand 2	D	1748	1753	anti-parallel
Strand 3	D	1777	1785	anti-parallel
Strand 4	D	1767	1774	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1824	1825	first strand
Strand 2	D	1846	1847	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1940	1942	first strand
Strand 2	D	1950	1952	anti-parallel

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There are 7 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1961	1962	first strand
Strand 2	D	1971	1978	anti-parallel
Strand 3	D	1981	1988	anti-parallel
Strand 4	D	2040	2043	parallel
Strand 5	D	2078	2082	parallel
Strand 6	D	2105	2110	parallel
Strand 7	D	2204	2206	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1993	1997	first strand
Strand 2	D	2009	2013	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2086	2089	first strand
Strand 2	D	2113	2116	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8XKZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8XKZ