Analysis of interatomic Contacts of Structural Units in PDB entry:
8XLK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XLK entry

There are 12 chains in PDB entry 8XLK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 25LYS 841
B
LEU 34LYS 844
C
LYS 25LYS 841
D
ILE 35GLN 845
E
ASP 21SER 138
F
ILE 21LYS 130
G
GLN 1ARG 227
H
ASP 1GLY 212
I
ASP 21SER 138
J
ILE 21LYS 130
K
VAL 22VAL 140
L
ASP 21LYS 126
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are115 helices in PDB entry 8XLK. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
35 54Right-handed alpha
Helix 2
AA2
A
70 82Right-handed alpha
Helix 3
AA3
A
83 85Right-handed 310
Helix 4
AA4
A
103 113Right-handed alpha
Helix 5
AA5
A
125 130Right-handed 310
Helix 6
AA6
A
143 158Right-handed alpha
Helix 7
AA7
A
170 187Right-handed alpha
Helix 8
AA8
A
204 214Right-handed alpha
Helix 9
AA9
A
224 238Right-handed alpha
Helix 10
AB1
A
251 254Right-handed 310
Helix 11
AB2
A
255 260Right-handed 310
Helix 12
AB3
A
276 297Right-handed alpha
Helix 13
AB4
A
316 327Right-handed alpha
Helix 14
AB5
A
457 471Right-handed alpha
Helix 15
AB6
A
499 507Right-handed alpha
Helix 16
AB7
A
520 525Right-handed alpha
Helix 17
AB8
A
559 580Right-handed alpha
Helix 18
AB9
A
581 584Right-handed 310
Helix 19
AC1
A
603 614Right-handed alpha
Helix 20
AC2
A
626 658Right-handed alpha
Helix 21
AC3
A
669 674Right-handed alpha
Helix 22
AC4
A
687 696Right-handed alpha
Helix 23
AC5
A
699 708Right-handed alpha
Helix 24
AC6
A
713 723Right-handed alpha
Helix 25
AC7
A
733 744Right-handed alpha
Helix 26
AC8
A
768 782Right-handed alpha
Helix 27
AC9
A
783 793Right-handed alpha
Helix 28
AD1
A
813 839Right-handed alpha
Helix 29
AD2
B
47 54Right-handed alpha
Helix 30
AD3
B
56 61Right-handed alpha
Helix 31
AD4
B
78 94Right-handed alpha
Helix 32
AD5
B
107 121Right-handed alpha
Helix 33
AD6
B
128 132Right-handed 310
Helix 34
AD7
B
150 165Right-handed alpha
Helix 35
AD8
B
179 194Right-handed alpha
Helix 36
AD9
B
211 221Right-handed alpha
Helix 37
AE1
B
232 246Right-handed alpha
Helix 38
AE2
B
258 263Right-handed alpha
Helix 39
AE3
B
287 311Right-handed alpha
Helix 40
AE4
B
330 338Right-handed alpha
Helix 41
AE5
B
459 472Right-handed alpha
Helix 42
AE6
B
494 502Right-handed alpha
Helix 43
AE7
B
515 522Right-handed alpha
Helix 44
AE8
B
547 551Right-handed 310
Helix 45
AE9
B
554 579Right-handed alpha
Helix 46
AF1
B
600 614Right-handed alpha
Helix 47
AF2
B
626 653Right-handed alpha
Helix 48
AF3
B
667 672Right-handed alpha
Helix 49
AF4
B
673 676Right-handed 310
Helix 50
AF5
B
688 698Right-handed alpha
Helix 51
AF6
B
698 706Right-handed alpha
Helix 52
AF7
B
712 722Right-handed alpha
Helix 53
AF8
B
732 742Right-handed alpha
Helix 54
AF9
B
743 745Right-handed 310
Helix 55
AG1
B
771 786Right-handed alpha
Helix 56
AG2
B
786 796Right-handed alpha
Helix 57
AG3
B
817 841Right-handed alpha
Helix 58
AG4
C
35 54Right-handed alpha
Helix 59
AG5
C
71 81Right-handed alpha
Helix 60
AG6
C
103 114Right-handed alpha
Helix 61
AG7
C
125 129Right-handed 310
Helix 62
AG8
C
145 159Right-handed alpha
Helix 63
AG9
C
170 186Right-handed alpha
Helix 64
AH1
C
204 213Right-handed alpha
Helix 65
AH2
C
224 238Right-handed alpha
Helix 66
AH3
C
251 255Right-handed 310
Helix 67
AH4
C
277 297Right-handed alpha
Helix 68
AH5
C
317 328Right-handed alpha
Helix 69
AH6
C
381 385Right-handed 310
Helix 70
AH7
C
457 470Right-handed alpha
Helix 71
AH8
C
500 507Right-handed alpha
Helix 72
AH9
C
520 527Right-handed alpha
Helix 73
AI1
C
559 580Right-handed alpha
Helix 74
AI2
C
603 616Right-handed alpha
Helix 75
AI3
C
627 657Right-handed alpha
Helix 76
AI4
C
669 674Right-handed alpha
Helix 77
AI5
C
687 696Right-handed alpha
Helix 78
AI6
C
699 707Right-handed alpha
Helix 79
AI7
C
713 723Right-handed alpha
Helix 80
AI8
C
733 744Right-handed alpha
Helix 81
AI9
C
768 782Right-handed alpha
Helix 82
AJ1
C
783 793Right-handed alpha
Helix 83
AJ2
C
810 828Right-handed alpha
Helix 84
AJ3
C
829 838Right-handed alpha
Helix 85
AJ4
D
47 52Right-handed alpha
Helix 86
AJ5
D
77 92Right-handed alpha
Helix 87
AJ6
D
106 118Right-handed alpha
Helix 88
AJ7
D
149 164Right-handed alpha
Helix 89
AJ8
D
179 192Right-handed alpha
Helix 90
AJ9
D
211 221Right-handed alpha
Helix 91
AK1
D
233 248Right-handed alpha
Helix 92
AK2
D
259 264Right-handed alpha
Helix 93
AK3
D
288 311Right-handed alpha
Helix 94
AK4
D
328 341Right-handed alpha
Helix 95
AK5
D
459 473Right-handed alpha
Helix 96
AK6
D
495 503Right-handed alpha
Helix 97
AK7
D
516 521Right-handed alpha
Helix 98
AK8
D
555 578Right-handed alpha
Helix 99
AK9
D
604 615Right-handed alpha
Helix 100
AL1
D
628 653Right-handed alpha
Helix 101
AL2
D
668 673Right-handed alpha
Helix 102
AL3
D
689 699Right-handed alpha
Helix 103
AL4
D
699 707Right-handed alpha
Helix 104
AL5
D
713 723Right-handed alpha
Helix 105
AL6
D
733 742Right-handed alpha
Helix 106
AL7
D
771 787Right-handed alpha
Helix 107
AL8
D
787 797Right-handed alpha
Helix 108
AL9
D
818 842Right-handed alpha
Helix 109
AM1
G
63 66Right-handed 310
Helix 110
AM2
G
88 92Right-handed 310
Helix 111
AM3
G
199 204Right-handed alpha
Helix 112
AM4
H
121 128Right-handed alpha
Helix 113
AM5
H
183 189Right-handed alpha
Helix 114
AM6
I
81 85Right-handed 310
Helix 115
AM7
I
120 124Right-handed 310
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There are 50 sheets in PDB entry 8XLK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
59 66first strand
Strand 2
A
26 33parallel
Strand 3
A
87 92parallel
Strand 4
A
118 120parallel
Strand 5
A
137 139parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
193 197first strand
Strand 2
A
164 168parallel
Strand 3
A
218 222parallel
Strand 4
A
246 249parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
267 271first strand
Strand 2
A
351 356anti-parallel
Strand 3
A
361 367anti-parallel
Strand 4
A
372 374anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
339 340first strand
Strand 2
A
346 347anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
475 478first strand
Strand 2
A
399 402parallel
Strand 3
A
512 513parallel
Strand 4
A
761 762anti-parallel
Strand 5
A
528 529anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
410 413first strand
Strand 2
A
451 456anti-parallel
Strand 3
A
434 438anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
487 490first strand
Strand 2
A
495 498anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
681 682first strand
Strand 2
A
728 732parallel
Strand 3
A
535 543anti-parallel
Strand 4
A
746 757anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
69 74first strand
Strand 2
B
36 41parallel
Strand 3
B
97 102parallel
Strand 4
B
124 126parallel
Strand 5
B
144 145parallel
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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
199 205first strand
Strand 2
B
169 174parallel
Strand 3
B
226 230parallel
Strand 4
B
254 257parallel
Strand 5
B
277 280parallel
Strand 6
B
361 366anti-parallel
Strand 7
B
372 379anti-parallel
Strand 8
B
382 385anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
405 406first strand
Strand 2
B
474 475parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
409 410first strand
Strand 2
B
478 479parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
418 420first strand
Strand 2
B
449 457anti-parallel
Strand 3
B
434 441anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
682 684first strand
Strand 2
B
727 731parallel
Strand 3
B
530 538anti-parallel
Strand 4
B
747 749anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
682 684first strand
Strand 2
B
727 731parallel
Strand 3
B
530 538anti-parallel
Strand 4
B
756 760anti-parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
59 62first strand
Strand 2
C
26 32parallel
Strand 3
C
90 92parallel
Strand 4
C
118 120parallel
Strand 5
C
137 139parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
193 197first strand
Strand 2
C
164 168parallel
Strand 3
C
218 220parallel
Strand 4
C
246 248parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
267 268first strand
Strand 2
C
353 356anti-parallel
Strand 3
C
361 367anti-parallel
Strand 4
C
372 374anti-parallel
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There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
410 413first strand
Strand 2
C
450 456anti-parallel
Strand 3
C
434 439anti-parallel
Strand 4
C
473 478parallel
Strand 5
C
397 402parallel
Strand 6
C
512 513parallel
Strand 7
C
761 762anti-parallel
Strand 8
C
528 529anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
487 489first strand
Strand 2
C
496 498anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
681 682first strand
Strand 2
C
728 732parallel
Strand 3
C
534 543anti-parallel
Strand 4
C
746 758anti-parallel
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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
67 73first strand
Strand 2
D
36 42parallel
Strand 3
D
96 99parallel
Strand 4
D
123 125parallel
Strand 5
D
143 145parallel
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There are 8 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
198 205first strand
Strand 2
D
168 174parallel
Strand 3
D
227 231parallel
Strand 4
D
255 258parallel
Strand 5
D
278 281parallel
Strand 6
D
362 367anti-parallel
Strand 7
D
373 380anti-parallel
Strand 8
D
383 386anti-parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
343 344first strand
Strand 2
D
347 348anti-parallel
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There are 10 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
419 421first strand
Strand 2
D
452 457anti-parallel
Strand 3
D
434 439anti-parallel
Strand 4
D
475 480parallel
Strand 5
D
405 410parallel
Strand 6
D
508 514parallel
Strand 7
D
757 766anti-parallel
Strand 8
D
530 539anti-parallel
Strand 9
D
728 732anti-parallel
Strand 10
D
683 685parallel
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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
524 525first strand
Strand 2
D
757 766anti-parallel
Strand 3
D
530 539anti-parallel
Strand 4
D
748 749anti-parallel
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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
23 27first strand
Strand 2
E
37 45anti-parallel
Strand 3
E
98 104anti-parallel
Strand 4
E
89 93anti-parallel
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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
78 80first strand
Strand 2
E
65 72anti-parallel
Strand 3
E
54 61anti-parallel
Strand 4
E
112 119anti-parallel
Strand 5
E
133 135anti-parallel
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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
23 26first strand
Strand 2
F
38 44anti-parallel
Strand 3
F
93 98anti-parallel
Strand 4
F
85 90anti-parallel
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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
68 72first strand
Strand 2
F
56 61anti-parallel
Strand 3
F
108 113anti-parallel
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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
4 7first strand
Strand 2
G
21 24anti-parallel
Strand 3
G
79 84anti-parallel
Strand 4
G
69 74anti-parallel
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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
11 12first strand
Strand 2
G
112 116parallel
Strand 3
G
93 100anti-parallel
Strand 4
G
35 41anti-parallel
Strand 5
G
48 53anti-parallel
Strand 6
G
59 61anti-parallel
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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
11 12first strand
Strand 2
G
112 116parallel
Strand 3
G
93 100anti-parallel
Strand 4
G
107 108anti-parallel
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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
130 132first strand
Strand 2
G
151 153anti-parallel
Strand 3
G
190 191anti-parallel
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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
210 214first strand
Strand 2
G
219 223anti-parallel
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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
4 5first strand
Strand 2
H
19 25anti-parallel
Strand 3
H
70 75anti-parallel
Strand 4
H
62 67anti-parallel
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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
53 54first strand
Strand 2
H
45 49anti-parallel
Strand 3
H
33 38anti-parallel
Strand 4
H
85 90anti-parallel
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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
114 118first strand
Strand 2
H
129 139anti-parallel
Strand 3
H
173 182anti-parallel
Strand 4
H
159 160anti-parallel
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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
145 150first strand
Strand 2
H
192 197anti-parallel
Strand 3
H
207 208anti-parallel
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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
23 27first strand
Strand 2
I
38 45anti-parallel
Strand 3
I
98 103anti-parallel
Strand 4
I
89 93anti-parallel
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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
78 79first strand
Strand 2
I
66 72anti-parallel
Strand 3
I
54 60anti-parallel
Strand 4
I
112 119anti-parallel
Strand 5
I
133 135anti-parallel
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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
23 26first strand
Strand 2
J
38 44anti-parallel
Strand 3
J
93 98anti-parallel
Strand 4
J
85 90anti-parallel
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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
49 50first strand
Strand 2
J
53 54anti-parallel
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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
68 71first strand
Strand 2
J
56 60anti-parallel
Strand 3
J
111 113anti-parallel
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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
23 27first strand
Strand 2
K
38 45anti-parallel
Strand 3
K
98 103anti-parallel
Strand 4
K
90 93anti-parallel
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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
57 59first strand
Strand 2
K
65 67anti-parallel
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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
113 114first strand
Strand 2
K
136 137anti-parallel
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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
117 118first strand
Strand 2
K
131 132anti-parallel
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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
38 44first strand
Strand 2
L
90 96anti-parallel
Strand 3
L
82 87anti-parallel
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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
65 66first strand
Strand 2
L
55 57anti-parallel
Strand 3
L
105 108anti-parallel
Strand 4
L
121 122anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il