Analysis of interatomic Contacts of Structural Units in PDB entry:
8XLP

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8XLP entry

There are 46 chains in PDB entry 8XLP (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
a	SER 10	ALA 336
b	GLY 2	LYS 504
c	ALA 38	ILE 486
d	ARG 11	LEU 351
e	TYR 20	GLY 83
f	PRO 11	ARG 42
h	ALA 2	GLY 66
i	MET 1	LYS 35
k	LYS 9	ARG 45
l	SER 2	ASN 38
m	ASN 2	GLN 39
t	MET 1	ALA 30
w	GLU 29	ARG 73
x	MET 1	LEU 36
y	ASN 3	LEU 34
z	MET 1	VAL 61
g	PRO 83	GLY 260
A	SER 10	ALA 336
B	GLY 2	LYS 504
C	ALA 38	ILE 486
D	ARG 11	LEU 351
E	TYR 20	GLY 83
F	PRO 11	ARG 42
H	ALA 2	GLY 66
I	MET 1	LYS 35
K	LYS 9	ARG 45
L	SER 2	ASN 38
M	ASN 2	GLN 39
T	MET 1	ALA 30
W	GLU 29	ARG 73
X	MET 1	LEU 36
Y	ASN 3	LEU 34
Z	MET 1	VAL 61
2	ASP 44	LEU 216
3	ASP 40	TYR 219
4	ARG 53	THR 215
5	PHE 47	PHE 229
6	ASN 65	ILE 237
G	PRO 83	GLY 260
1	TYR 41	PRO 230
O	ASP 44	LEU 216
P	ASP 40	TYR 219
Q	ARG 53	THR 215
R	PHE 47	PHE 229
S	ASN 65	ILE 237
N	TYR 41	PRO 230

There are286 helices in PDB entry 8XLP. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	a	12	22	Right-handed alpha
Helix 2	AA2	a	30	55	Right-handed alpha
Helix 3	AA3	a	70	74	Right-handed 310
Helix 4	AA4	a	95	99	Right-handed 310
Helix 5	AA5	a	101	108	Right-handed alpha
Helix 6	AA6	a	109	138	Right-handed alpha
Helix 7	AA7	a	142	159	Right-handed alpha
Helix 8	AA8	a	159	166	Right-handed alpha
Helix 9	AA9	a	167	171	Right-handed 310
Helix 10	AB1	a	176	191	Right-handed alpha
Helix 11	AB2	a	192	194	Right-handed 310
Helix 12	AB3	a	195	222	Right-handed alpha
Helix 13	AB4	a	232	237	Right-handed 310
Helix 14	AB5	a	247	259	Right-handed alpha
Helix 15	AB6	a	267	295	Right-handed alpha
Helix 16	AB7	a	316	333	Right-handed alpha
Helix 17	AB8	b	4	13	Right-handed 310
Helix 18	AB9	b	15	45	Right-handed alpha
Helix 19	AC1	b	54	58	Right-handed 310
Helix 20	AC2	b	61	69	Right-handed alpha
Helix 21	AC3	b	92	117	Right-handed alpha
Helix 22	AC4	b	120	124	Right-handed 310
Helix 23	AC5	b	134	156	Right-handed alpha
Helix 24	AC6	b	186	190	Right-handed 310
Helix 25	AC7	b	194	219	Right-handed alpha
Helix 26	AC8	b	222	229	Right-handed alpha
Helix 27	AC9	b	233	259	Right-handed alpha
Helix 28	AD1	b	264	269	Right-handed alpha
Helix 29	AD2	b	271	277	Right-handed alpha
Helix 30	AD3	b	278	294	Right-handed alpha
Helix 31	AD4	b	297	304	Right-handed alpha
Helix 32	AD5	b	306	313	Right-handed alpha
Helix 33	AD6	b	314	322	Right-handed 310
Helix 34	AD7	b	329	335	Right-handed alpha
Helix 35	AD8	b	391	396	Right-handed alpha
Helix 36	AD9	b	413	425	Right-handed alpha
Helix 37	AE1	b	446	475	Right-handed alpha
Helix 38	AE2	b	476	479	Right-handed 310
Helix 39	AE3	b	485	490	Right-handed alpha
Helix 40	AE4	c	41	46	Right-handed alpha
Helix 41	AE5	c	48	57	Right-handed 310
Helix 42	AE6	c	59	88	Right-handed alpha
Helix 43	AE7	c	94	98	Right-handed 310
Helix 44	AE8	c	101	109	Right-handed alpha
Helix 45	AE9	c	114	118	Right-handed 310
Helix 46	AF1	c	122	149	Right-handed alpha
Helix 47	AF2	c	167	195	Right-handed alpha
Helix 48	AF3	c	219	228	Right-handed alpha
Helix 49	AF4	c	236	241	Right-handed 310
Helix 50	AF5	c	243	268	Right-handed alpha
Helix 51	AF6	c	271	276	Right-handed alpha
Helix 52	AF7	c	281	307	Right-handed alpha
Helix 53	AF8	c	312	317	Right-handed alpha
Helix 54	AF9	c	319	337	Right-handed alpha
Helix 55	AG1	c	367	373	Right-handed 310
Helix 56	AG2	c	380	382	Right-handed 310
Helix 57	AG3	c	390	397	Right-handed alpha
Helix 58	AG4	c	399	412	Right-handed alpha
Helix 59	AG5	c	435	468	Right-handed alpha
Helix 60	AG6	c	478	483	Right-handed alpha
Helix 61	AG7	d	12	22	Right-handed alpha
Helix 62	AG8	d	29	53	Right-handed alpha
Helix 63	AG9	d	99	106	Right-handed alpha
Helix 64	AH1	d	107	136	Right-handed alpha
Helix 65	AH2	d	145	157	Right-handed alpha
Helix 66	AH3	d	157	163	Right-handed alpha
Helix 67	AH4	d	165	169	Right-handed 310
Helix 68	AH5	d	174	189	Right-handed alpha
Helix 69	AH6	d	190	192	Right-handed 310
Helix 70	AH7	d	193	219	Right-handed alpha
Helix 71	AH8	d	244	256	Right-handed alpha
Helix 72	AH9	d	262	290	Right-handed alpha
Helix 73	AI1	d	297	306	Right-handed alpha
Helix 74	AI2	d	312	333	Right-handed alpha
Helix 75	AI3	d	334	337	Right-handed 310
Helix 76	AI4	e	21	41	Right-handed alpha
Helix 77	AI5	e	42	49	Right-handed alpha
Helix 78	AI6	e	72	81	Right-handed alpha
Helix 79	AI7	f	14	23	Right-handed alpha
Helix 80	AI8	f	24	39	Right-handed alpha
Helix 81	AI9	h	5	11	Right-handed alpha
Helix 82	AJ1	h	12	16	Right-handed 310
Helix 83	AJ2	h	27	50	Right-handed alpha
Helix 84	AJ3	h	61	66	Right-handed 310
Helix 85	AJ4	i	2	24	Right-handed alpha
Helix 86	AJ5	i	26	30	Right-handed 310
Helix 87	AJ6	k	14	16	Right-handed 310
Helix 88	AJ7	k	17	24	Right-handed alpha
Helix 89	AJ8	k	26	42	Right-handed alpha
Helix 90	AJ9	l	14	38	Right-handed alpha
Helix 91	AK1	m	4	37	Right-handed alpha
Helix 92	AK2	t	2	23	Right-handed alpha
Helix 93	AK3	w	35	37	Right-handed 310
Helix 94	AK4	w	38	60	Right-handed alpha
Helix 95	AK5	x	2	19	Right-handed alpha
Helix 96	AK6	x	19	34	Right-handed alpha
Helix 97	AK7	y	4	31	Right-handed alpha
Helix 98	AK8	z	2	29	Right-handed alpha
Helix 99	AK9	z	36	60	Right-handed alpha
Helix 100	AL1	g	84	87	Right-handed 310
Helix 101	AL2	g	88	115	Right-handed alpha
Helix 102	AL3	g	149	163	Right-handed alpha
Helix 103	AL4	g	166	170	Right-handed 310
Helix 104	AL5	g	224	237	Right-handed alpha
Helix 105	AL6	g	249	259	Right-handed alpha
Helix 106	AL7	A	12	22	Right-handed alpha
Helix 107	AL8	A	30	55	Right-handed alpha
Helix 108	AL9	A	70	74	Right-handed 310
Helix 109	AM1	A	95	99	Right-handed 310
Helix 110	AM2	A	101	108	Right-handed alpha
Helix 111	AM3	A	109	138	Right-handed alpha
Helix 112	AM4	A	142	159	Right-handed alpha
Helix 113	AM5	A	159	166	Right-handed alpha
Helix 114	AM6	A	167	171	Right-handed 310
Helix 115	AM7	A	176	191	Right-handed alpha
Helix 116	AM8	A	192	194	Right-handed 310
Helix 117	AM9	A	195	222	Right-handed alpha
Helix 118	AN1	A	232	237	Right-handed 310
Helix 119	AN2	A	247	259	Right-handed alpha
Helix 120	AN3	A	267	295	Right-handed alpha
Helix 121	AN4	A	316	333	Right-handed alpha
Helix 122	AN5	B	4	13	Right-handed 310
Helix 123	AN6	B	15	45	Right-handed alpha
Helix 124	AN7	B	54	58	Right-handed 310
Helix 125	AN8	B	61	69	Right-handed alpha
Helix 126	AN9	B	92	117	Right-handed alpha
Helix 127	AO1	B	120	124	Right-handed 310
Helix 128	AO2	B	134	156	Right-handed alpha
Helix 129	AO3	B	186	190	Right-handed 310
Helix 130	AO4	B	194	219	Right-handed alpha
Helix 131	AO5	B	222	229	Right-handed alpha
Helix 132	AO6	B	233	259	Right-handed alpha
Helix 133	AO7	B	264	269	Right-handed alpha
Helix 134	AO8	B	271	277	Right-handed alpha
Helix 135	AO9	B	278	294	Right-handed alpha
Helix 136	AP1	B	297	304	Right-handed alpha
Helix 137	AP2	B	306	313	Right-handed alpha
Helix 138	AP3	B	314	322	Right-handed 310
Helix 139	AP4	B	329	335	Right-handed alpha
Helix 140	AP5	B	391	396	Right-handed alpha
Helix 141	AP6	B	413	425	Right-handed alpha
Helix 142	AP7	B	446	475	Right-handed alpha
Helix 143	AP8	B	476	479	Right-handed 310
Helix 144	AP9	B	485	490	Right-handed alpha
Helix 145	AQ1	C	41	46	Right-handed alpha
Helix 146	AQ2	C	48	57	Right-handed 310
Helix 147	AQ3	C	59	88	Right-handed alpha
Helix 148	AQ4	C	94	98	Right-handed 310
Helix 149	AQ5	C	101	109	Right-handed alpha
Helix 150	AQ6	C	114	118	Right-handed 310
Helix 151	AQ7	C	122	148	Right-handed alpha
Helix 152	AQ8	C	167	195	Right-handed alpha
Helix 153	AQ9	C	219	228	Right-handed alpha
Helix 154	AR1	C	236	241	Right-handed 310
Helix 155	AR2	C	243	268	Right-handed alpha
Helix 156	AR3	C	271	276	Right-handed alpha
Helix 157	AR4	C	281	307	Right-handed alpha
Helix 158	AR5	C	312	317	Right-handed alpha
Helix 159	AR6	C	319	337	Right-handed alpha
Helix 160	AR7	C	367	373	Right-handed 310
Helix 161	AR8	C	380	382	Right-handed 310
Helix 162	AR9	C	390	397	Right-handed alpha
Helix 163	AS1	C	399	412	Right-handed alpha
Helix 164	AS2	C	435	468	Right-handed alpha
Helix 165	AS3	C	478	483	Right-handed alpha
Helix 166	AS4	D	12	22	Right-handed alpha
Helix 167	AS5	D	29	53	Right-handed alpha
Helix 168	AS6	D	99	106	Right-handed alpha
Helix 169	AS7	D	107	136	Right-handed alpha
Helix 170	AS8	D	145	157	Right-handed alpha
Helix 171	AS9	D	157	163	Right-handed alpha
Helix 172	AT1	D	165	169	Right-handed 310
Helix 173	AT2	D	174	189	Right-handed alpha
Helix 174	AT3	D	190	192	Right-handed 310
Helix 175	AT4	D	193	219	Right-handed alpha
Helix 176	AT5	D	244	256	Right-handed alpha
Helix 177	AT6	D	262	290	Right-handed alpha
Helix 178	AT7	D	297	306	Right-handed alpha
Helix 179	AT8	D	312	333	Right-handed alpha
Helix 180	AT9	D	334	337	Right-handed 310
Helix 181	AU1	E	21	41	Right-handed alpha
Helix 182	AU2	E	42	49	Right-handed alpha
Helix 183	AU3	E	72	81	Right-handed alpha
Helix 184	AU4	F	14	39	Right-handed alpha
Helix 185	AU5	H	5	12	Right-handed alpha
Helix 186	AU6	H	13	16	Right-handed 310
Helix 187	AU7	H	27	50	Right-handed alpha
Helix 188	AU8	H	61	66	Right-handed 310
Helix 189	AU9	I	2	24	Right-handed alpha
Helix 190	AV1	I	26	30	Right-handed 310
Helix 191	AV2	K	14	16	Right-handed 310
Helix 192	AV3	K	17	24	Right-handed alpha
Helix 193	AV4	K	26	42	Right-handed alpha
Helix 194	AV5	L	14	38	Right-handed alpha
Helix 195	AV6	M	4	37	Right-handed alpha
Helix 196	AV7	T	2	23	Right-handed alpha
Helix 197	AV8	W	35	37	Right-handed 310
Helix 198	AV9	W	38	60	Right-handed alpha
Helix 199	AW1	X	2	19	Right-handed alpha
Helix 200	AW2	X	19	34	Right-handed alpha
Helix 201	AW3	Y	4	31	Right-handed alpha
Helix 202	AW4	Z	2	29	Right-handed alpha
Helix 203	AW5	Z	36	61	Right-handed alpha
Helix 204	AW6	2	78	106	Right-handed alpha
Helix 205	AW7	2	115	127	Right-handed alpha
Helix 206	AW8	2	127	153	Right-handed alpha
Helix 207	AW9	2	170	203	Right-handed alpha
Helix 208	AX1	2	205	211	Right-handed alpha
Helix 209	AX2	3	68	73	Right-handed alpha
Helix 210	AX3	3	74	102	Right-handed alpha
Helix 211	AX4	3	113	121	Right-handed alpha
Helix 212	AX5	3	122	142	Right-handed alpha
Helix 213	AX6	3	170	203	Right-handed alpha
Helix 214	AX7	3	205	211	Right-handed alpha
Helix 215	AX8	3	215	219	Right-handed 310
Helix 216	AX9	4	71	76	Right-handed alpha
Helix 217	AY1	4	77	102	Right-handed alpha
Helix 218	AY2	4	109	114	Right-handed alpha
Helix 219	AY3	4	119	130	Right-handed alpha
Helix 220	AY4	4	130	156	Right-handed alpha
Helix 221	AY5	4	174	207	Right-handed alpha
Helix 222	AY6	4	209	215	Right-handed alpha
Helix 223	AY7	5	74	79	Right-handed alpha
Helix 224	AY8	5	80	108	Right-handed alpha
Helix 225	AY9	5	117	127	Right-handed alpha
Helix 226	AZ1	5	129	154	Right-handed alpha
Helix 227	AZ2	5	174	176	Right-handed 310
Helix 228	AZ3	5	177	207	Right-handed alpha
Helix 229	AZ4	5	209	216	Right-handed alpha
Helix 230	AZ5	6	90	95	Right-handed alpha
Helix 231	AZ6	6	96	122	Right-handed alpha
Helix 232	AZ7	6	134	142	Right-handed alpha
Helix 233	AZ8	6	143	163	Right-handed alpha
Helix 234	AZ9	6	191	224	Right-handed alpha
Helix 235	BA1	6	226	233	Right-handed alpha
Helix 236	BA2	G	88	115	Right-handed alpha
Helix 237	BA3	G	149	163	Right-handed alpha
Helix 238	BA4	G	166	170	Right-handed 310
Helix 239	BA5	G	224	237	Right-handed alpha
Helix 240	BA6	G	249	259	Right-handed alpha
Helix 241	BA7	1	77	82	Right-handed alpha
Helix 242	BA8	1	83	111	Right-handed alpha
Helix 243	BA9	1	125	136	Right-handed alpha
Helix 244	BB1	1	136	152	Right-handed alpha
Helix 245	BB2	1	152	162	Right-handed alpha
Helix 246	BB3	1	181	214	Right-handed alpha
Helix 247	BB4	1	216	223	Right-handed alpha
Helix 248	BB5	O	78	106	Right-handed alpha
Helix 249	BB6	O	115	127	Right-handed alpha
Helix 250	BB7	O	127	153	Right-handed alpha
Helix 251	BB8	O	170	203	Right-handed alpha
Helix 252	BB9	O	205	211	Right-handed alpha
Helix 253	BC1	P	68	73	Right-handed alpha
Helix 254	BC2	P	74	102	Right-handed alpha
Helix 255	BC3	P	113	121	Right-handed alpha
Helix 256	BC4	P	122	142	Right-handed alpha
Helix 257	BC5	P	170	203	Right-handed alpha
Helix 258	BC6	P	205	211	Right-handed alpha
Helix 259	BC7	P	215	219	Right-handed 310
Helix 260	BC8	Q	71	76	Right-handed alpha
Helix 261	BC9	Q	77	102	Right-handed alpha
Helix 262	BD1	Q	109	115	Right-handed alpha
Helix 263	BD2	Q	119	130	Right-handed alpha
Helix 264	BD3	Q	130	156	Right-handed alpha
Helix 265	BD4	Q	174	207	Right-handed alpha
Helix 266	BD5	Q	209	215	Right-handed alpha
Helix 267	BD6	R	74	79	Right-handed alpha
Helix 268	BD7	R	80	108	Right-handed alpha
Helix 269	BD8	R	117	127	Right-handed alpha
Helix 270	BD9	R	129	154	Right-handed alpha
Helix 271	BE1	R	174	176	Right-handed 310
Helix 272	BE2	R	177	207	Right-handed alpha
Helix 273	BE3	R	209	216	Right-handed alpha
Helix 274	BE4	S	90	95	Right-handed alpha
Helix 275	BE5	S	96	122	Right-handed alpha
Helix 276	BE6	S	134	142	Right-handed alpha
Helix 277	BE7	S	143	163	Right-handed alpha
Helix 278	BE8	S	191	224	Right-handed alpha
Helix 279	BE9	S	226	233	Right-handed alpha
Helix 280	BF1	N	77	82	Right-handed alpha
Helix 281	BF2	N	83	111	Right-handed alpha
Helix 282	BF3	N	125	136	Right-handed alpha
Helix 283	BF4	N	136	152	Right-handed alpha
Helix 284	BF5	N	152	162	Right-handed alpha
Helix 285	BF6	N	181	214	Right-handed alpha
Helix 286	BF7	N	216	223	Right-handed alpha

There are 18 sheets in PDB entry 8XLP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	81	82	first strand
Strand 2	a	174	175	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	306	307	first strand
Strand 2	a	313	314	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	166	168	first strand
Strand 2	b	177	179	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	336	340	first strand
Strand 2	b	430	433	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	377	380	first strand
Strand 2	b	369	371	anti-parallel
Strand 3	b	353	356	anti-parallel
Strand 4	b	343	347	anti-parallel
Strand 5	b	398	402	anti-parallel
Strand 6	b	410	411	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	199	201	first strand
Strand 2	c	209	211	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	355	357	first strand
Strand 2	c	363	365	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	384	385	first strand
Strand 2	c	388	389	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	76	77	first strand
Strand 2	d	172	173	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	82	first strand
Strand 2	A	174	175	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	306	307	first strand
Strand 2	A	313	314	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	166	168	first strand
Strand 2	B	177	179	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	336	340	first strand
Strand 2	B	430	433	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	377	380	first strand
Strand 2	B	369	371	anti-parallel
Strand 3	B	353	356	anti-parallel
Strand 4	B	343	347	anti-parallel
Strand 5	B	398	402	anti-parallel
Strand 6	B	410	411	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	199	201	first strand
Strand 2	C	209	211	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	355	357	first strand
Strand 2	C	363	365	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	384	385	first strand
Strand 2	C	388	389	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	77	first strand
Strand 2	D	172	173	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8XLP

Analysis of interatomic Contacts of Structural Units in PDB entry:
8XLP