Analysis of interatomic Contacts of Structural Units in PDB entry:
8XM1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XM1 entry

There is 1 chain in PDB entry 8XM1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 10ILE 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 8XM1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 37Right-handed alpha
Helix 2
AA2
A
53 74Right-handed alpha
Helix 3
AA3
A
94 109Right-handed alpha
Helix 4
AA4
A
130 135Right-handed alpha
Helix 5
AA5
A
140 153Right-handed alpha
Helix 6
AA6
A
157 163Right-handed alpha
Helix 7
AA7
A
163 175Right-handed alpha
Helix 8
AA8
A
176 178Right-handed 310
Helix 9
AA9
A
179 188Right-handed alpha
Helix 10
AB1
A
193 197Right-handed 310
Helix 11
AB2
A
215 233Right-handed alpha
Helix 12
AB3
A
238 242Right-handed 310
Helix 13
AB4
A
245 265Right-handed alpha
Helix 14
AB5
A
266 287Right-handed alpha
Helix 15
AB6
A
310 322Right-handed alpha
Helix 16
AB7
A
363 369Right-handed alpha
Helix 17
AB8
A
401 412Right-handed alpha
Helix 18
AB9
A
413 417Right-handed 310
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There are 3 sheets in PDB entry 8XM1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
87 91parallel
Strand 3
A
304 309parallel
Strand 4
A
12 21parallel
Strand 5
A
339 346anti-parallel
Strand 6
A
353 361anti-parallel
Strand 7
A
381 384anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
87 91parallel
Strand 3
A
304 309parallel
Strand 4
A
12 21parallel
Strand 5
A
339 346anti-parallel
Strand 6
A
353 361anti-parallel
Strand 7
A
399 400anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 204first strand
Strand 2
A
211 214anti-parallel
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