Analysis of interatomic Contacts of Structural Units in PDB entry:
8XMN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XMN entry

There are 3 chains in PDB entry 8XMN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 8GLU 1768
B
 GLY 20ALA 192
C
 MET 30MET 148
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 8XMN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 31Right-handed alpha
Helix 2
AA2
A
60 64Right-handed 310
Helix 3
AA3
A
67 71Right-handed 310
Helix 4
AA4
A
79 85Right-handed alpha
Helix 5
AA5
A
104 108Right-handed 310
Helix 6
AA6
A
113 124Right-handed alpha
Helix 7
AA7
A
125 144Right-handed alpha
Helix 8
AA8
A
151 175Right-handed alpha
Helix 9
AA9
A
182 186Right-handed 310
Helix 10
AB1
A
187 206Right-handed alpha
Helix 11
AB2
A
210 219Right-handed alpha
Helix 12
AB3
A
222 228Right-handed alpha
Helix 13
AB4
A
231 243Right-handed alpha
Helix 14
AB5
A
246 268Right-handed alpha
Helix 15
AB6
A
269 271Right-handed 310
Helix 16
AB7
A
285 292Right-handed alpha
Helix 17
AB8
A
296 301Right-handed alpha
Helix 18
AB9
A
346 359Right-handed alpha
Helix 19
AC1
A
362 375Right-handed alpha
Helix 20
AC2
A
378 422Right-handed alpha
Helix 21
AC3
A
729 740Right-handed alpha
Helix 22
AC4
A
745 762Right-handed alpha
Helix 23
AC5
A
769 798Right-handed alpha
Helix 24
AC6
A
799 804Right-handed alpha
Helix 25
AC7
A
806 825Right-handed alpha
Helix 26
AC8
A
832 838Right-handed 310
Helix 27
AC9
A
839 848Right-handed 310
Helix 28
AD1
A
849 862Right-handed alpha
Helix 29
AD2
A
866 889Right-handed alpha
Helix 30
AD3
A
890 895Right-handed alpha
Helix 31
AD4
A
895 900Right-handed alpha
Helix 32
AD5
A
912 926Right-handed alpha
Helix 33
AD6
A
928 940Right-handed alpha
Helix 34
AD7
A
940 972Right-handed alpha
Helix 35
AD8
A
986 1014Right-handed alpha
Helix 36
AD9
A
1176 1191Right-handed alpha
Helix 37
AE1
A
1191 1210Right-handed alpha
Helix 38
AE2
A
1211 1212Right-handed 310
Helix 39
AE3
A
1213 1218Right-handed 310
Helix 40
AE4
A
1219 1249Right-handed alpha
Helix 41
AE5
A
1249 1255Right-handed alpha
Helix 42
AE6
A
1256 1278Right-handed alpha
Helix 43
AE7
A
1283 1285Right-handed 310
Helix 44
AE8
A
1286 1291Right-handed alpha
Helix 45
AE9
A
1292 1303Right-handed 310
Helix 46
AF1
A
1304 1316Right-handed alpha
Helix 47
AF2
A
1317 1343Right-handed alpha
Helix 48
AF3
A
1366 1375Right-handed alpha
Helix 49
AF4
A
1391 1403Right-handed alpha
Helix 50
AF5
A
1407 1416Right-handed alpha
Helix 51
AF6
A
1430 1432Right-handed 310
Helix 52
AF7
A
1433 1466Right-handed alpha
Helix 53
AF8
A
1475 1489Right-handed alpha
Helix 54
AF9
A
1502 1513Right-handed alpha
Helix 55
AG1
A
1514 1534Right-handed alpha
Helix 56
AG2
A
1540 1569Right-handed alpha
Helix 57
AG3
A
1572 1575Right-handed 310
Helix 58
AG4
A
1576 1603Right-handed alpha
Helix 59
AG5
A
1605 1613Right-handed alpha
Helix 60
AG6
A
1616 1621Right-handed alpha
Helix 61
AG7
A
1622 1627Right-handed alpha
Helix 62
AG8
A
1630 1666Right-handed alpha
Helix 63
AG9
A
1683 1696Right-handed alpha
Helix 64
AH1
A
1699 1705Right-handed alpha
Helix 65
AH2
A
1732 1767Right-handed alpha
Helix 66
AH3
B
112 115Right-handed 310
Helix 67
AH4
B
153 192Right-handed alpha
Helix 68
AH5
C
104 108Right-handed 310
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There are 9 sheets in PDB entry 8XMN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 75first strand
Strand 2
A
88 91anti-parallel
Strand 3
A
97 100anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 277first strand
Strand 2
A
328 332anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1349 1352first strand
Strand 2
A
1380 1383anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 31first strand
Strand 2
B
138 147parallel
Strand 3
B
117 128anti-parallel
Strand 4
B
50 61anti-parallel
Strand 5
B
68 74anti-parallel
Strand 6
B
77 80anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 31first strand
Strand 2
B
138 147parallel
Strand 3
B
117 128anti-parallel
Strand 4
B
133 135anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 38first strand
Strand 2
B
106 108anti-parallel
Strand 3
B
90 92anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
31 33first strand
Strand 2
C
51 53anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
37 41first strand
Strand 2
C
138 147parallel
Strand 3
C
123 130anti-parallel
Strand 4
C
64 70anti-parallel
Strand 5
C
78 83anti-parallel
Strand 6
C
87 89anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 48first strand
Strand 2
C
112 114anti-parallel
Strand 3
C
99 101anti-parallel
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