Analysis of interatomic Contacts of Structural Units in PDB entry:
8XOL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XOL entry

There is 1 chain in PDB entry 8XOL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 7GLY 1277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 8XOL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 15Right-handed 310
Helix 2
AA2
A
17 24Right-handed alpha
Helix 3
AA3
A
27 37Right-handed alpha
Helix 4
AA4
A
40 44Right-handed 310
Helix 5
AA5
A
48 51Right-handed 310
Helix 6
AA6
A
52 74Right-handed alpha
Helix 7
AA7
A
79 122Right-handed alpha
Helix 8
AA8
A
127 181Right-handed alpha
Helix 9
AA9
A
182 189Right-handed alpha
Helix 10
AB1
A
190 200Right-handed alpha
Helix 11
AB2
A
201 203Right-handed 310
Helix 12
AB3
A
204 212Right-handed alpha
Helix 13
AB4
A
213 234Right-handed alpha
Helix 14
AB5
A
235 282Right-handed alpha
Helix 15
AB6
A
282 290Right-handed alpha
Helix 16
AB7
A
291 342Right-handed alpha
Helix 17
AB8
A
347 392Right-handed alpha
Helix 18
AB9
A
450 456Right-handed alpha
Helix 19
AC1
A
488 495Right-handed alpha
Helix 20
AC2
A
500 511Right-handed alpha
Helix 21
AC3
A
513 520Right-handed alpha
Helix 22
AC4
A
529 533Right-handed 310
Helix 23
AC5
A
536 552Right-handed alpha
Helix 24
AC6
A
560 565Right-handed alpha
Helix 25
AC7
A
566 578Right-handed alpha
Helix 26
AC8
A
593 599Right-handed alpha
Helix 27
AC9
A
697 709Right-handed alpha
Helix 28
AD1
A
710 751Right-handed alpha
Helix 29
AD2
A
760 807Right-handed alpha
Helix 30
AD3
A
809 815Right-handed alpha
Helix 31
AD4
A
817 835Right-handed alpha
Helix 32
AD5
A
835 861Right-handed alpha
Helix 33
AD6
A
864 910Right-handed alpha
Helix 34
AD7
A
910 918Right-handed alpha
Helix 35
AD8
A
919 970Right-handed alpha
Helix 36
AD9
A
971 974Right-handed 310
Helix 37
AE1
A
975 1007Right-handed alpha
Helix 38
AE2
A
1007 1018Right-handed alpha
Helix 39
AE3
A
1078 1089Right-handed alpha
Helix 40
AE4
A
1109 1116Right-handed alpha
Helix 41
AE5
A
1130 1136Right-handed alpha
Helix 42
AE6
A
1142 1153Right-handed alpha
Helix 43
AE7
A
1155 1161Right-handed alpha
Helix 44
AE8
A
1164 1168Right-handed 310
Helix 45
AE9
A
1178 1194Right-handed alpha
Helix 46
AF1
A
1208 1223Right-handed alpha
Helix 47
AF2
A
1234 1240Right-handed alpha
Helix 48
AF3
A
1257 1261Right-handed 310
Helix 49
AF4
A
1267 1276Right-handed alpha
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There are 5 sheets in PDB entry 8XOL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
410 415first strand
Strand 2
A
431 435anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
441 444first strand
Strand 2
A
602 605parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 477first strand
Strand 2
A
555 559parallel
Strand 3
A
589 590parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1064 1065first strand
Strand 2
A
1041 1044anti-parallel
Strand 3
A
1097 1100anti-parallel
Strand 4
A
1103 1104anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1118 1120first strand
Strand 2
A
1197 1201parallel
Strand 3
A
1227 1231parallel
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