Analysis of interatomic Contacts of Structural Units in PDB entry:
8XQ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XQ8 entry

There is 1 chain in PDB entry 8XQ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 73TYR 1194
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 8XQ8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
76 95Right-handed alpha
Helix 2
AA2
A
101 120Right-handed alpha
Helix 3
AA3
A
120 131Right-handed alpha
Helix 4
AA4
A
134 153Right-handed alpha
Helix 5
AA5
A
155 162Right-handed alpha
Helix 6
AA6
A
162 189Right-handed alpha
Helix 7
AA7
A
194 206Right-handed alpha
Helix 8
AA8
A
211 220Right-handed alpha
Helix 9
AA9
A
223 253Right-handed alpha
Helix 10
AB1
A
260 292Right-handed alpha
Helix 11
AB2
A
296 318Right-handed alpha
Helix 12
AB3
A
322 337Right-handed alpha
Helix 13
AB4
A
342 375Right-handed alpha
Helix 14
AB5
A
381 406Right-handed alpha
Helix 15
AB6
A
406 412Right-handed alpha
Helix 16
AB7
A
418 428Right-handed alpha
Helix 17
AB8
A
432 447Right-handed alpha
Helix 18
AB9
A
449 481Right-handed alpha
Helix 19
AC1
A
487 513Right-handed alpha
Helix 20
AC2
A
522 530Right-handed alpha
Helix 21
AC3
A
548 558Right-handed alpha
Helix 22
AC4
A
571 600Right-handed alpha
Helix 23
AC5
A
604 621Right-handed alpha
Helix 24
AC6
A
639 652Right-handed alpha
Helix 25
AC7
A
671 677Right-handed alpha
Helix 26
AC8
A
678 705Right-handed alpha
Helix 27
AC9
A
727 754Right-handed alpha
Helix 28
AD1
A
754 760Right-handed alpha
Helix 29
AD2
A
761 784Right-handed alpha
Helix 30
AD3
A
795 858Right-handed alpha
Helix 31
AD4
A
860 889Right-handed alpha
Helix 32
AD5
A
889 919Right-handed alpha
Helix 33
AD6
A
923 943Right-handed alpha
Helix 34
AD7
A
952 959Right-handed alpha
Helix 35
AD8
A
960 964Right-handed 310
Helix 36
AD9
A
966 976Right-handed alpha
Helix 37
AE1
A
1043 1050Right-handed alpha
Helix 38
AE2
A
1070 1079Right-handed alpha
Helix 39
AE3
A
1085 1108Right-handed alpha
Helix 40
AE4
A
1113 1123Right-handed alpha
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There are 4 sheets in PDB entry 8XQ8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
979 982first strand
Strand 2
A
1063 1069anti-parallel
Strand 3
A
997 1003anti-parallel
Strand 4
A
1041 1042anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
987 989first strand
Strand 2
A
1055 1059anti-parallel
Strand 3
A
1006 1010anti-parallel
Strand 4
A
1032 1036anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1125 1126first strand
Strand 2
A
1185 1190anti-parallel
Strand 3
A
1142 1149anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1135 1137first strand
Strand 2
A
1173 1175anti-parallel
Strand 3
A
1152 1154anti-parallel
Strand 4
A
1159 1161anti-parallel
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