Analysis of interatomic Contacts of Structural Units in PDB entry:
8XS5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XS5 entry

There are 2 chains in PDB entry 8XS5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 93LYS 718
B
 THR 3LYS 718
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 8XS5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
93 121Right-handed alpha
Helix 2
AA2
A
158 191Right-handed alpha
Helix 3
AA3
A
216 228Right-handed alpha
Helix 4
AA4
A
241 269Right-handed alpha
Helix 5
AA5
A
291 313Right-handed alpha
Helix 6
AA6
A
329 339Right-handed alpha
Helix 7
AA7
A
360 366Right-handed 310
Helix 8
AA8
A
370 400Right-handed alpha
Helix 9
AA9
A
428 437Right-handed alpha
Helix 10
AB1
A
440 451Right-handed alpha
Helix 11
AB2
A
456 489Right-handed alpha
Helix 12
AB3
A
568 583Right-handed alpha
Helix 13
AB4
A
623 647Right-handed alpha
Helix 14
AB5
A
654 659Right-handed alpha
Helix 15
AB6
A
659 677Right-handed alpha
Helix 16
AB7
A
678 680Right-handed 310
Helix 17
AB8
A
684 699Right-handed alpha
Helix 18
AB9
A
703 709Right-handed alpha
Helix 19
AC1
B
4 30Right-handed alpha
Helix 20
AC2
B
31 33Right-handed 310
Helix 21
AC3
B
34 39Right-handed alpha
Helix 22
AC4
B
74 79Right-handed alpha
Helix 23
AC5
B
83 91Right-handed alpha
Helix 24
AC6
B
92 120Right-handed alpha
Helix 25
AC7
B
157 195Right-handed alpha
Helix 26
AC8
B
198 201Right-handed 310
Helix 27
AC9
B
216 229Right-handed alpha
Helix 28
AD1
B
242 269Right-handed alpha
Helix 29
AD2
B
291 315Right-handed alpha
Helix 30
AD3
B
329 337Right-handed alpha
Helix 31
AD4
B
360 364Right-handed 310
Helix 32
AD5
B
367 369Right-handed 310
Helix 33
AD6
B
370 388Right-handed alpha
Helix 34
AD7
B
389 399Right-handed alpha
Helix 35
AD8
B
421 438Right-handed alpha
Helix 36
AD9
B
440 452Right-handed alpha
Helix 37
AE1
B
456 476Right-handed alpha
Helix 38
AE2
B
477 489Right-handed alpha
Helix 39
AE3
B
504 509Right-handed alpha
Helix 40
AE4
B
512 532Right-handed alpha
Helix 41
AE5
B
534 548Right-handed alpha
Helix 42
AE6
B
554 559Right-handed alpha
Helix 43
AE7
B
565 584Right-handed alpha
Helix 44
AE8
B
590 612Right-handed alpha
Helix 45
AE9
B
623 647Right-handed alpha
Helix 46
AF1
B
654 659Right-handed alpha
Helix 47
AF2
B
659 677Right-handed alpha
Helix 48
AF3
B
677 682Right-handed alpha
Helix 49
AF4
B
684 699Right-handed alpha
Helix 50
AF5
B
703 709Right-handed alpha
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There are 2 sheets in PDB entry 8XS5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 207first strand
Strand 2
A
319 327anti-parallel
Strand 3
A
233 240anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
233 240first strand
Strand 2
B
319 327anti-parallel
Strand 3
B
203 207anti-parallel
Strand 4
B
349 352anti-parallel
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