Analysis of interatomic Contacts of Structural Units in PDB entry:
8XSN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XSN entry

There is 1 chain in PDB entry 8XSN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1PHE 462
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8XSN. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
1 15Right-handed alpha
Helix 2
AA2
A
17 31Right-handed alpha
Helix 3
AA3
A
36 38Right-handed 310
Helix 4
AA4
A
39 51Right-handed alpha
Helix 5
AA5
A
52 65Right-handed alpha
Helix 6
AA6
A
70 93Right-handed alpha
Helix 7
AA7
A
105 126Right-handed alpha
Helix 8
AA8
A
126 131Right-handed alpha
Helix 9
AA9
A
134 136Right-handed 310
Helix 10
AB1
A
137 147Right-handed alpha
Helix 11
AB2
A
149 160Right-handed alpha
Helix 12
AB3
A
219 242Right-handed alpha
Helix 13
AB4
A
297 316Right-handed alpha
Helix 14
AB5
A
317 320Right-handed 310
Helix 15
AB6
A
321 327Right-handed alpha
Helix 16
AB7
A
330 355Right-handed alpha
Helix 17
AB8
A
359 382Right-handed alpha
Helix 18
AB9
A
392 425Right-handed alpha
Helix 19
AC1
A
426 452Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8XSN.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
97 98first strand
Strand 2
A
103 104anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il