Analysis of interatomic Contacts of Structural Units in PDB entry:
8XSR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XSR entry

There are 2 chains in PDB entry 8XSR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -1LEU 572
B
 ARG 13GLY 628
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 8XSR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-1 10Right-handed alpha
Helix 2
AA2
A
13 30Right-handed alpha
Helix 3
AA3
A
33 45Right-handed alpha
Helix 4
AA4
A
51 71Right-handed alpha
Helix 5
AA5
A
72 99Right-handed alpha
Helix 6
AA6
A
102 110Right-handed alpha
Helix 7
AA7
A
122 135Right-handed alpha
Helix 8
AA8
A
137 153Right-handed alpha
Helix 9
AA9
A
158 165Right-handed alpha
Helix 10
AB1
A
165 203Right-handed alpha
Helix 11
AB2
A
205 210Right-handed alpha
Helix 12
AB3
A
220 238Right-handed alpha
Helix 13
AB4
A
240 266Right-handed alpha
Helix 14
AB5
A
271 293Right-handed alpha
Helix 15
AB6
A
296 313Right-handed alpha
Helix 16
AB7
A
373 382Right-handed alpha
Helix 17
AB8
A
400 402Right-handed 310
Helix 18
AB9
A
403 410Right-handed alpha
Helix 19
AC1
A
425 429Right-handed alpha
Helix 20
AC2
A
437 448Right-handed alpha
Helix 21
AC3
A
450 456Right-handed alpha
Helix 22
AC4
A
473 484Right-handed alpha
Helix 23
AC5
A
503 518Right-handed alpha
Helix 24
AC6
A
552 560Right-handed alpha
Helix 25
AC7
A
560 569Right-handed alpha
Helix 26
AC8
B
17 25Right-handed alpha
Helix 27
AC9
B
31 50Right-handed alpha
Helix 28
AD1
B
50 68Right-handed alpha
Helix 29
AD2
B
77 88Right-handed alpha
Helix 30
AD3
B
90 99Right-handed alpha
Helix 31
AD4
B
109 158Right-handed alpha
Helix 32
AD5
B
161 166Right-handed alpha
Helix 33
AD6
B
173 177Right-handed 310
Helix 34
AD7
B
179 189Right-handed alpha
Helix 35
AD8
B
196 208Right-handed alpha
Helix 36
AD9
B
220 223Right-handed 310
Helix 37
AE1
B
224 234Right-handed alpha
Helix 38
AE2
B
238 243Right-handed alpha
Helix 39
AE3
B
245 262Right-handed alpha
Helix 40
AE4
B
262 268Right-handed alpha
Helix 41
AE5
B
269 271Right-handed 310
Helix 42
AE6
B
272 284Right-handed alpha
Helix 43
AE7
B
286 297Right-handed alpha
Helix 44
AE8
B
300 305Right-handed alpha
Helix 45
AE9
B
305 324Right-handed alpha
Helix 46
AF1
B
329 344Right-handed alpha
Helix 47
AF2
B
351 359Right-handed alpha
Helix 48
AF3
B
360 364Right-handed 310
Helix 49
AF4
B
365 371Right-handed alpha
Helix 50
AF5
B
429 438Right-handed alpha
Helix 51
AF6
B
459 466Right-handed alpha
Helix 52
AF7
B
480 487Right-handed alpha
Helix 53
AF8
B
493 504Right-handed alpha
Helix 54
AF9
B
506 511Right-handed alpha
Helix 55
AG1
B
531 543Right-handed alpha
Helix 56
AG2
B
559 570Right-handed alpha
Helix 57
AG3
B
608 614Right-handed alpha
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There are 6 sheets in PDB entry 8XSR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
339 341first strand
Strand 2
A
351 354anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 414first strand
Strand 2
A
492 496parallel
Strand 3
A
522 527parallel
Strand 4
A
363 368parallel
Strand 5
A
538 543parallel
Strand 6
A
546 551anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 394first strand
Strand 2
A
397 398anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 424first strand
Strand 2
A
464 465anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
391 394first strand
Strand 2
B
447 450anti-parallel
Strand 3
B
453 454anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
467 470first strand
Strand 2
B
548 552parallel
Strand 3
B
578 582parallel
Strand 4
B
419 423parallel
Strand 5
B
595 599parallel
Strand 6
B
602 607anti-parallel
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