Analysis of interatomic Contacts of Structural Units in PDB entry:
8XST


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XST entry

There are 2 chains in PDB entry 8XST (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -1LEU 572
B
 ARG 13LYS 631
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 8XST. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-1 10Right-handed alpha
Helix 2
AA2
A
22 27Right-handed alpha
Helix 3
AA3
A
32 45Right-handed alpha
Helix 4
AA4
A
50 57Right-handed alpha
Helix 5
AA5
A
57 71Right-handed alpha
Helix 6
AA6
A
75 83Right-handed alpha
Helix 7
AA7
A
87 99Right-handed alpha
Helix 8
AA8
A
102 110Right-handed alpha
Helix 9
AA9
A
121 130Right-handed alpha
Helix 10
AB1
A
137 153Right-handed alpha
Helix 11
AB2
A
154 157Right-handed 310
Helix 12
AB3
A
158 165Right-handed alpha
Helix 13
AB4
A
170 203Right-handed alpha
Helix 14
AB5
A
203 208Right-handed alpha
Helix 15
AB6
A
220 238Right-handed alpha
Helix 16
AB7
A
240 267Right-handed alpha
Helix 17
AB8
A
271 293Right-handed alpha
Helix 18
AB9
A
296 302Right-handed alpha
Helix 19
AC1
A
303 313Right-handed alpha
Helix 20
AC2
A
373 382Right-handed alpha
Helix 21
AC3
A
398 402Right-handed 310
Helix 22
AC4
A
403 409Right-handed alpha
Helix 23
AC5
A
425 429Right-handed alpha
Helix 24
AC6
A
430 433Right-handed 310
Helix 25
AC7
A
440 448Right-handed alpha
Helix 26
AC8
A
450 455Right-handed alpha
Helix 27
AC9
A
474 487Right-handed alpha
Helix 28
AD1
A
503 518Right-handed alpha
Helix 29
AD2
A
552 558Right-handed alpha
Helix 30
AD3
A
560 569Right-handed alpha
Helix 31
AD4
B
17 27Right-handed alpha
Helix 32
AD5
B
32 40Right-handed alpha
Helix 33
AD6
B
50 68Right-handed alpha
Helix 34
AD7
B
77 88Right-handed alpha
Helix 35
AD8
B
90 100Right-handed alpha
Helix 36
AD9
B
109 158Right-handed alpha
Helix 37
AE1
B
161 166Right-handed alpha
Helix 38
AE2
B
173 178Right-handed alpha
Helix 39
AE3
B
178 190Right-handed alpha
Helix 40
AE4
B
196 208Right-handed alpha
Helix 41
AE5
B
215 219Right-handed 310
Helix 42
AE6
B
222 236Right-handed alpha
Helix 43
AE7
B
238 243Right-handed alpha
Helix 44
AE8
B
249 261Right-handed alpha
Helix 45
AE9
B
262 268Right-handed alpha
Helix 46
AF1
B
271 297Right-handed alpha
Helix 47
AF2
B
300 305Right-handed alpha
Helix 48
AF3
B
306 308Right-handed 310
Helix 49
AF4
B
309 324Right-handed alpha
Helix 50
AF5
B
329 344Right-handed alpha
Helix 51
AF6
B
354 363Right-handed alpha
Helix 52
AF7
B
364 372Right-handed alpha
Helix 53
AF8
B
430 438Right-handed alpha
Helix 54
AF9
B
454 458Right-handed 310
Helix 55
AG1
B
459 468Right-handed alpha
Helix 56
AG2
B
480 486Right-handed alpha
Helix 57
AG3
B
493 498Right-handed alpha
Helix 58
AG4
B
499 502Right-handed 310
Helix 59
AG5
B
506 511Right-handed alpha
Helix 60
AG6
B
531 544Right-handed alpha
Helix 61
AG7
B
559 570Right-handed alpha
Helix 62
AG8
B
608 614Right-handed alpha
Helix 63
AG9
B
617 627Right-handed alpha
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There are 5 sheets in PDB entry 8XST. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 339first strand
Strand 2
A
354 357anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 414first strand
Strand 2
A
492 496parallel
Strand 3
A
522 526parallel
Strand 4
A
363 367parallel
Strand 5
A
538 542parallel
Strand 6
A
547 551anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 424first strand
Strand 2
A
464 465anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
421 423first strand
Strand 2
B
595 597parallel
Strand 3
B
605 607anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
469 470first strand
Strand 2
B
548 552parallel
Strand 3
B
578 582parallel
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