Analysis of interatomic Contacts of Structural Units in PDB entry:
8XU1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XU1 entry

There are 3 chains in PDB entry 8XU1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ILE 435
B
 SER 2ILE 435
C
 SER 2ILE 435
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 8XU1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 27Right-handed alpha
Helix 2
AA2
A
36 41Right-handed alpha
Helix 3
AA3
A
68 76Right-handed alpha
Helix 4
AA4
A
86 97Right-handed alpha
Helix 5
AA5
A
101 115Right-handed alpha
Helix 6
AA6
A
119 129Right-handed alpha
Helix 7
AA7
A
134 146Right-handed alpha
Helix 8
AA8
A
147 149Right-handed 310
Helix 9
AA9
A
150 158Right-handed alpha
Helix 10
AB1
A
166 194Right-handed alpha
Helix 11
AB2
A
206 216Right-handed alpha
Helix 12
AB3
A
220 232Right-handed alpha
Helix 13
AB4
A
239 250Right-handed alpha
Helix 14
AB5
A
254 267Right-handed alpha
Helix 15
AB6
A
273 288Right-handed alpha
Helix 16
AB7
A
296 309Right-handed alpha
Helix 17
AB8
A
326 340Right-handed alpha
Helix 18
AB9
A
343 363Right-handed alpha
Helix 19
AC1
A
373 384Right-handed alpha
Helix 20
AC2
A
388 390Right-handed 310
Helix 21
AC3
A
391 414Right-handed alpha
Helix 22
AC4
A
425 434Right-handed alpha
Helix 23
AC5
B
3 27Right-handed alpha
Helix 24
AC6
B
36 41Right-handed alpha
Helix 25
AC7
B
68 76Right-handed alpha
Helix 26
AC8
B
86 97Right-handed alpha
Helix 27
AC9
B
101 116Right-handed alpha
Helix 28
AD1
B
119 129Right-handed alpha
Helix 29
AD2
B
134 146Right-handed alpha
Helix 30
AD3
B
147 149Right-handed 310
Helix 31
AD4
B
150 158Right-handed alpha
Helix 32
AD5
B
166 194Right-handed alpha
Helix 33
AD6
B
206 216Right-handed alpha
Helix 34
AD7
B
220 232Right-handed alpha
Helix 35
AD8
B
239 251Right-handed alpha
Helix 36
AD9
B
254 267Right-handed alpha
Helix 37
AE1
B
273 289Right-handed alpha
Helix 38
AE2
B
296 309Right-handed alpha
Helix 39
AE3
B
326 340Right-handed alpha
Helix 40
AE4
B
343 363Right-handed alpha
Helix 41
AE5
B
373 384Right-handed alpha
Helix 42
AE6
B
388 390Right-handed 310
Helix 43
AE7
B
391 414Right-handed alpha
Helix 44
AE8
B
425 434Right-handed alpha
Helix 45
AE9
C
3 27Right-handed alpha
Helix 46
AF1
C
35 41Right-handed alpha
Helix 47
AF2
C
68 76Right-handed alpha
Helix 48
AF3
C
86 97Right-handed alpha
Helix 49
AF4
C
101 116Right-handed alpha
Helix 50
AF5
C
119 129Right-handed alpha
Helix 51
AF6
C
134 146Right-handed alpha
Helix 52
AF7
C
147 149Right-handed 310
Helix 53
AF8
C
150 158Right-handed alpha
Helix 54
AF9
C
166 194Right-handed alpha
Helix 55
AG1
C
206 216Right-handed alpha
Helix 56
AG2
C
220 232Right-handed alpha
Helix 57
AG3
C
239 251Right-handed alpha
Helix 58
AG4
C
254 267Right-handed alpha
Helix 59
AG5
C
273 289Right-handed alpha
Helix 60
AG6
C
296 309Right-handed alpha
Helix 61
AG7
C
326 340Right-handed alpha
Helix 62
AG8
C
343 363Right-handed alpha
Helix 63
AG9
C
373 384Right-handed alpha
Helix 64
AH1
C
388 390Right-handed 310
Helix 65
AH2
C
391 414Right-handed alpha
Helix 66
AH3
C
425 434Right-handed alpha
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There are 6 sheets in PDB entry 8XU1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 35first strand
Strand 2
B
30 35anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 50first strand
Strand 2
B
422 424parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 57first strand
Strand 2
A
61 64anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
422 424first strand
Strand 2
B
47 50parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 57first strand
Strand 2
B
61 64anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
54 57first strand
Strand 2
C
61 64anti-parallel
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