Analysis of interatomic Contacts of Structural Units in PDB entry:
8XU5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XU5 entry

There are 2 chains in PDB entry 8XU5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 265PRO 499
B
 ALA 265GLN 487
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 8XU5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
266 285Right-handed alpha
Helix 2
AA2
A
288 296Right-handed alpha
Helix 3
AA3
A
301 311Right-handed alpha
Helix 4
AA4
A
312 338Right-handed alpha
Helix 5
AA5
A
345 369Right-handed alpha
Helix 6
AA6
A
384 392Right-handed 310
Helix 7
AA7
A
393 410Right-handed alpha
Helix 8
AA8
A
413 426Right-handed alpha
Helix 9
AA9
A
435 458Right-handed alpha
Helix 10
AB1
A
461 466Right-handed alpha
Helix 11
AB2
A
468 486Right-handed alpha
Helix 12
AB3
B
266 285Right-handed alpha
Helix 13
AB4
B
288 296Right-handed alpha
Helix 14
AB5
B
301 311Right-handed alpha
Helix 15
AB6
B
312 338Right-handed alpha
Helix 16
AB7
B
345 365Right-handed alpha
Helix 17
AB8
B
366 368Right-handed 310
Helix 18
AB9
B
384 389Right-handed 310
Helix 19
AC1
B
393 410Right-handed alpha
Helix 20
AC2
B
413 426Right-handed alpha
Helix 21
AC3
B
435 458Right-handed alpha
Helix 22
AC4
B
461 466Right-handed alpha
Helix 23
AC5
B
468 486Right-handed alpha
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There are 2 sheets in PDB entry 8XU5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
376 378first strand
Strand 2
A
381 383anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
376 378first strand
Strand 2
B
381 383anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il