Analysis of interatomic Contacts of Structural Units in PDB entry:
8XUS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8XUS entry

There are 3 chains in PDB entry 8XUS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	THR 23	GLU 1144
A	THR 23	GLU 1144
B	THR 23	GLU 1144

There are 70 helices in PDB entry 8XUS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	294	303	Right-handed alpha
Helix 2	AA2	C	337	343	Right-handed alpha
Helix 3	AA3	C	349	353	Right-handed 310
Helix 4	AA4	C	365	371	Right-handed alpha
Helix 5	AA5	C	385	389	Right-handed 310
Helix 6	AA6	C	403	410	Right-handed alpha
Helix 7	AA7	C	417	422	Right-handed alpha
Helix 8	AA8	C	502	506	Right-handed 310
Helix 9	AA9	C	616	627	Right-handed alpha
Helix 10	AB1	C	737	743	Right-handed alpha
Helix 11	AB2	C	746	755	Right-handed alpha
Helix 12	AB3	C	760	783	Right-handed alpha
Helix 13	AB4	C	816	825	Right-handed alpha
Helix 14	AB5	C	840	844	Right-handed 310
Helix 15	AB6	C	848	856	Right-handed alpha
Helix 16	AB7	C	868	885	Right-handed alpha
Helix 17	AB8	C	886	890	Right-handed 310
Helix 18	AB9	C	897	909	Right-handed alpha
Helix 19	AC1	C	912	919	Right-handed alpha
Helix 20	AC2	C	919	941	Right-handed alpha
Helix 21	AC3	C	945	965	Right-handed alpha
Helix 22	AC4	C	966	968	Right-handed 310
Helix 23	AC5	C	976	984	Right-handed alpha
Helix 24	AC6	C	985	1033	Right-handed alpha
Helix 25	AC7	A	294	303	Right-handed alpha
Helix 26	AC8	A	337	343	Right-handed alpha
Helix 27	AC9	A	349	353	Right-handed 310
Helix 28	AD1	A	365	371	Right-handed alpha
Helix 29	AD2	A	383	388	Right-handed alpha
Helix 30	AD3	A	403	410	Right-handed alpha
Helix 31	AD4	A	416	422	Right-handed alpha
Helix 32	AD5	A	502	506	Right-handed 310
Helix 33	AD6	A	616	627	Right-handed alpha
Helix 34	AD7	A	737	743	Right-handed alpha
Helix 35	AD8	A	746	755	Right-handed alpha
Helix 36	AD9	A	760	783	Right-handed alpha
Helix 37	AE1	A	816	825	Right-handed alpha
Helix 38	AE2	A	848	856	Right-handed alpha
Helix 39	AE3	A	868	885	Right-handed alpha
Helix 40	AE4	A	886	890	Right-handed 310
Helix 41	AE5	A	897	909	Right-handed alpha
Helix 42	AE6	A	912	919	Right-handed alpha
Helix 43	AE7	A	919	941	Right-handed alpha
Helix 44	AE8	A	945	965	Right-handed alpha
Helix 45	AE9	A	966	968	Right-handed 310
Helix 46	AF1	A	976	984	Right-handed alpha
Helix 47	AF2	A	985	1033	Right-handed alpha
Helix 48	AF3	B	294	303	Right-handed alpha
Helix 49	AF4	B	337	343	Right-handed alpha
Helix 50	AF5	B	349	353	Right-handed 310
Helix 51	AF6	B	365	371	Right-handed alpha
Helix 52	AF7	B	383	388	Right-handed alpha
Helix 53	AF8	B	403	410	Right-handed alpha
Helix 54	AF9	B	416	422	Right-handed alpha
Helix 55	AG1	B	502	506	Right-handed 310
Helix 56	AG2	B	616	627	Right-handed alpha
Helix 57	AG3	B	737	743	Right-handed alpha
Helix 58	AG4	B	746	755	Right-handed alpha
Helix 59	AG5	B	760	783	Right-handed alpha
Helix 60	AG6	B	816	825	Right-handed alpha
Helix 61	AG7	B	848	855	Right-handed alpha
Helix 62	AG8	B	868	885	Right-handed alpha
Helix 63	AG9	B	886	890	Right-handed 310
Helix 64	AH1	B	897	909	Right-handed alpha
Helix 65	AH2	B	912	919	Right-handed alpha
Helix 66	AH3	B	919	941	Right-handed alpha
Helix 67	AH4	B	945	965	Right-handed alpha
Helix 68	AH5	B	966	968	Right-handed 310
Helix 69	AH6	B	976	984	Right-handed alpha
Helix 70	AH7	B	985	1033	Right-handed alpha

There are 45 sheets in PDB entry 8XUS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	30	first strand
Strand 2	C	61	65	anti-parallel
Strand 3	C	264	269	anti-parallel
Strand 4	C	90	94	anti-parallel
Strand 5	C	189	195	anti-parallel
Strand 6	C	201	208	anti-parallel
Strand 7	C	222	229	anti-parallel
Strand 8	C	36	37	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	55	first strand
Strand 2	C	271	279	anti-parallel
Strand 3	C	285	290	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	237	240	anti-parallel
Strand 3	C	104	107	anti-parallel
Strand 4	C	117	121	anti-parallel
Strand 5	C	126	129	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	316	first strand
Strand 2	C	595	599	anti-parallel
Strand 3	C	609	613	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	642	645	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	358	first strand
Strand 2	C	395	402	anti-parallel
Strand 3	C	508	514	anti-parallel
Strand 4	C	432	437	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	361	362	first strand
Strand 2	C	524	525	parallel
Strand 3	C	391	392	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	454	first strand
Strand 2	C	492	494	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	474	first strand
Strand 2	C	488	489	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	539	543	first strand
Strand 2	C	546	554	anti-parallel
Strand 3	C	583	588	anti-parallel
Strand 4	C	575	578	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	660	first strand
Strand 2	C	691	697	parallel
Strand 3	C	670	675	anti-parallel
Strand 4	C	664	667	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	701	704	first strand
Strand 2	B	787	790	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	715	first strand
Strand 2	C	1072	1077	anti-parallel
Strand 3	C	1094	1097	anti-parallel
Strand 4	C	1102	1105	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	718	728	first strand
Strand 2	C	1059	1069	anti-parallel
Strand 3	C	1047	1056	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	733	734	first strand
Strand 2	C	860	861	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	787	788	first strand
Strand 2	A	701	702	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1081	1082	first strand
Strand 2	C	1087	1090	anti-parallel
Strand 3	C	1120	1122	anti-parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	26	30	first strand
Strand 2	A	61	65	anti-parallel
Strand 3	A	264	269	anti-parallel
Strand 4	A	90	95	anti-parallel
Strand 5	A	189	195	anti-parallel
Strand 6	A	201	208	anti-parallel
Strand 7	A	222	229	anti-parallel
Strand 8	A	36	37	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	55	first strand
Strand 2	A	271	279	anti-parallel
Strand 3	A	285	290	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	240	anti-parallel
Strand 3	A	104	107	anti-parallel
Strand 4	A	116	121	anti-parallel
Strand 5	A	126	129	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	318	first strand
Strand 2	A	593	599	anti-parallel
Strand 3	A	609	613	anti-parallel
Strand 4	A	648	651	anti-parallel
Strand 5	A	642	645	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	358	first strand
Strand 2	A	395	402	anti-parallel
Strand 3	A	508	514	anti-parallel
Strand 4	A	432	437	anti-parallel
Strand 5	A	374	376	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	362	first strand
Strand 2	A	524	525	parallel
Strand 3	A	391	392	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	492	494	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	488	489	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	539	543	first strand
Strand 2	A	546	555	anti-parallel
Strand 3	A	584	588	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	660	first strand
Strand 2	A	691	697	parallel
Strand 3	A	670	675	anti-parallel
Strand 4	A	664	667	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	715	first strand
Strand 2	A	1072	1077	anti-parallel
Strand 3	A	1094	1097	anti-parallel
Strand 4	A	1102	1105	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	718	728	first strand
Strand 2	A	1059	1069	anti-parallel
Strand 3	A	1047	1056	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	733	734	first strand
Strand 2	A	860	861	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	787	788	first strand
Strand 2	B	701	702	parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1081	1082	first strand
Strand 2	A	1087	1090	anti-parallel
Strand 3	A	1120	1122	anti-parallel

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There are 7 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	26	29	first strand
Strand 2	B	62	65	anti-parallel
Strand 3	B	264	269	anti-parallel
Strand 4	B	90	95	anti-parallel
Strand 5	B	189	195	anti-parallel
Strand 6	B	201	208	anti-parallel
Strand 7	B	224	229	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	55	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	285	290	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	237	240	anti-parallel
Strand 3	B	104	107	anti-parallel
Strand 4	B	116	118	anti-parallel
Strand 5	B	129	131	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	316	first strand
Strand 2	B	595	599	anti-parallel
Strand 3	B	609	612	anti-parallel
Strand 4	B	648	651	anti-parallel
Strand 5	B	642	645	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	358	first strand
Strand 2	B	395	402	anti-parallel
Strand 3	B	508	514	anti-parallel
Strand 4	B	432	437	anti-parallel
Strand 5	B	374	376	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	361	362	first strand
Strand 2	B	524	525	parallel
Strand 3	B	391	392	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	454	first strand
Strand 2	B	492	494	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	473	474	first strand
Strand 2	B	488	489	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	539	543	first strand
Strand 2	B	546	554	anti-parallel
Strand 3	B	584	588	anti-parallel
Strand 4	B	575	577	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	660	first strand
Strand 2	B	691	697	parallel
Strand 3	B	670	675	anti-parallel
Strand 4	B	664	667	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	715	first strand
Strand 2	B	1072	1077	anti-parallel
Strand 3	B	1094	1097	anti-parallel
Strand 4	B	1102	1105	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	718	728	first strand
Strand 2	B	1059	1069	anti-parallel
Strand 3	B	1047	1056	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	733	734	first strand
Strand 2	B	860	861	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1081	1082	first strand
Strand 2	B	1087	1090	anti-parallel
Strand 3	B	1120	1122	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8XUS

Analysis of interatomic Contacts of Structural Units in PDB entry:
8XUS