Analysis of interatomic Contacts of Structural Units in PDB entry:
8XUT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8XUT entry

There are 3 chains in PDB entry 8XUT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	GLN 26	PRO 1140
A	GLN 26	PRO 1140
C	GLN 26	PRO 1140

There are 60 helices in PDB entry 8XUT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	294	304	Right-handed alpha
Helix 2	AA2	B	367	371	Right-handed 310
Helix 3	AA3	B	383	387	Right-handed 310
Helix 4	AA4	B	403	411	Right-handed 310
Helix 5	AA5	B	737	743	Right-handed alpha
Helix 6	AA6	B	746	757	Right-handed alpha
Helix 7	AA7	B	759	783	Right-handed alpha
Helix 8	AA8	B	816	826	Right-handed alpha
Helix 9	AA9	B	866	884	Right-handed alpha
Helix 10	AB1	B	886	891	Right-handed alpha
Helix 11	AB2	B	897	908	Right-handed alpha
Helix 12	AB3	B	912	919	Right-handed alpha
Helix 13	AB4	B	919	941	Right-handed alpha
Helix 14	AB5	B	945	967	Right-handed alpha
Helix 15	AB6	B	977	984	Right-handed alpha
Helix 16	AB7	B	985	1033	Right-handed alpha
Helix 17	AB8	B	1116	1118	Right-handed 310
Helix 18	AB9	A	96	100	Right-handed 310
Helix 19	AC1	A	294	304	Right-handed alpha
Helix 20	AC2	A	364	369	Right-handed alpha
Helix 21	AC3	A	383	387	Right-handed 310
Helix 22	AC4	A	406	411	Right-handed 310
Helix 23	AC5	A	438	443	Right-handed alpha
Helix 24	AC6	A	502	506	Right-handed 310
Helix 25	AC7	A	738	743	Right-handed alpha
Helix 26	AC8	A	746	754	Right-handed alpha
Helix 27	AC9	A	759	783	Right-handed alpha
Helix 28	AD1	A	816	826	Right-handed alpha
Helix 29	AD2	A	851	856	Right-handed 310
Helix 30	AD3	A	866	884	Right-handed alpha
Helix 31	AD4	A	886	890	Right-handed 310
Helix 32	AD5	A	897	907	Right-handed alpha
Helix 33	AD6	A	908	910	Right-handed 310
Helix 34	AD7	A	913	918	Right-handed alpha
Helix 35	AD8	A	919	941	Right-handed alpha
Helix 36	AD9	A	945	964	Right-handed alpha
Helix 37	AE1	A	965	967	Right-handed 310
Helix 38	AE2	A	977	984	Right-handed alpha
Helix 39	AE3	A	985	1032	Right-handed alpha
Helix 40	AE4	A	1116	1118	Right-handed 310
Helix 41	AE5	C	96	100	Right-handed 310
Helix 42	AE6	C	294	304	Right-handed alpha
Helix 43	AE7	C	364	369	Right-handed alpha
Helix 44	AE8	C	383	387	Right-handed 310
Helix 45	AE9	C	405	411	Right-handed 310
Helix 46	AF1	C	738	743	Right-handed alpha
Helix 47	AF2	C	746	757	Right-handed alpha
Helix 48	AF3	C	760	783	Right-handed alpha
Helix 49	AF4	C	816	826	Right-handed alpha
Helix 50	AF5	C	852	856	Right-handed 310
Helix 51	AF6	C	866	884	Right-handed alpha
Helix 52	AF7	C	886	891	Right-handed alpha
Helix 53	AF8	C	897	907	Right-handed alpha
Helix 54	AF9	C	908	910	Right-handed 310
Helix 55	AG1	C	913	919	Right-handed alpha
Helix 56	AG2	C	919	941	Right-handed alpha
Helix 57	AG3	C	942	944	Right-handed 310
Helix 58	AG4	C	945	964	Right-handed alpha
Helix 59	AG5	C	976	984	Right-handed alpha
Helix 60	AG6	C	985	1033	Right-handed alpha

There are 40 sheets in PDB entry 8XUT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	31	first strand
Strand 2	B	60	64	anti-parallel
Strand 3	B	266	269	anti-parallel
Strand 4	B	90	93	anti-parallel
Strand 5	B	188	195	anti-parallel
Strand 6	B	200	209	anti-parallel
Strand 7	B	224	230	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	55	first strand
Strand 2	B	271	274	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	172	first strand
Strand 2	B	126	129	anti-parallel
Strand 3	B	116	120	anti-parallel
Strand 4	B	101	107	anti-parallel
Strand 5	B	237	242	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	277	279	first strand
Strand 2	B	285	288	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	325	328	first strand
Strand 2	B	539	543	parallel
Strand 3	B	547	553	anti-parallel
Strand 4	B	584	588	anti-parallel
Strand 5	B	575	577	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	356	358	first strand
Strand 2	B	395	400	anti-parallel
Strand 3	B	508	514	anti-parallel
Strand 4	B	432	437	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	595	598	first strand
Strand 2	B	609	613	anti-parallel
Strand 3	B	648	651	anti-parallel
Strand 4	B	642	644	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	660	first strand
Strand 2	B	692	697	parallel
Strand 3	B	671	674	anti-parallel
Strand 4	B	664	665	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	703	704	first strand
Strand 2	A	789	790	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	715	first strand
Strand 2	B	1072	1078	anti-parallel
Strand 3	B	1094	1097	anti-parallel
Strand 4	B	1102	1105	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	718	723	first strand
Strand 2	B	1059	1069	anti-parallel
Strand 3	B	726	728	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	718	723	first strand
Strand 2	B	1059	1069	anti-parallel
Strand 3	B	1047	1056	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	733	735	first strand
Strand 2	B	859	861	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	789	790	first strand
Strand 2	C	703	704	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1122	first strand
Strand 2	B	1086	1090	anti-parallel
Strand 3	B	1081	1083	anti-parallel
Strand 4	B	1133	1134	parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	31	first strand
Strand 2	A	60	64	anti-parallel
Strand 3	A	266	269	anti-parallel
Strand 4	A	90	93	anti-parallel
Strand 5	A	188	195	anti-parallel
Strand 6	A	200	209	anti-parallel
Strand 7	A	224	230	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	49	first strand
Strand 2	A	277	279	anti-parallel
Strand 3	A	285	288	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	55	first strand
Strand 2	A	271	274	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	241	anti-parallel
Strand 3	A	103	107	anti-parallel
Strand 4	A	117	120	anti-parallel
Strand 5	A	126	128	anti-parallel
Strand 6	A	171	172	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	327	first strand
Strand 2	A	539	542	parallel
Strand 3	A	547	550	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	355	358	first strand
Strand 2	A	395	402	anti-parallel
Strand 3	A	508	514	anti-parallel
Strand 4	A	432	437	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	565	567	first strand
Strand 2	A	573	577	anti-parallel
Strand 3	A	584	586	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	595	598	first strand
Strand 2	A	609	613	anti-parallel
Strand 3	A	648	651	anti-parallel
Strand 4	A	642	643	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	655	first strand
Strand 2	A	692	696	parallel
Strand 3	A	670	674	anti-parallel
Strand 4	A	664	665	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	728	first strand
Strand 2	A	1059	1077	anti-parallel
Strand 3	A	1047	1056	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	728	first strand
Strand 2	A	1059	1077	anti-parallel
Strand 3	A	1094	1097	anti-parallel
Strand 4	A	1102	1105	anti-parallel
Strand 5	A	1113	1114	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1120	1122	first strand
Strand 2	A	1086	1090	anti-parallel
Strand 3	A	1081	1083	anti-parallel
Strand 4	A	1133	1134	parallel

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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	28	first strand
Strand 2	C	63	64	anti-parallel
Strand 3	C	266	269	anti-parallel
Strand 4	C	90	93	anti-parallel
Strand 5	C	188	195	anti-parallel
Strand 6	C	201	209	anti-parallel
Strand 7	C	224	229	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	49	first strand
Strand 2	C	277	279	anti-parallel
Strand 3	C	285	288	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	52	55	first strand
Strand 2	C	271	274	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	237	241	anti-parallel
Strand 3	C	103	107	anti-parallel
Strand 4	C	117	120	anti-parallel
Strand 5	C	126	128	anti-parallel
Strand 6	C	171	172	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	312	first strand
Strand 2	C	595	599	anti-parallel
Strand 3	C	609	613	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	642	645	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	325	327	first strand
Strand 2	C	539	542	parallel
Strand 3	C	547	553	anti-parallel
Strand 4	C	584	588	anti-parallel
Strand 5	C	575	577	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	358	first strand
Strand 2	C	395	403	anti-parallel
Strand 3	C	507	514	anti-parallel
Strand 4	C	432	434	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	454	first strand
Strand 2	C	492	494	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	660	first strand
Strand 2	C	692	697	parallel
Strand 3	C	670	674	anti-parallel
Strand 4	C	664	667	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	717	first strand
Strand 2	C	1071	1077	anti-parallel
Strand 3	C	1094	1097	anti-parallel
Strand 4	C	1102	1105	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	720	728	first strand
Strand 2	C	1059	1067	anti-parallel
Strand 3	C	1047	1056	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	735	736	first strand
Strand 2	C	858	859	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1120	1122	first strand
Strand 2	C	1086	1090	anti-parallel
Strand 3	C	1081	1083	anti-parallel
Strand 4	C	1133	1134	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8XUT

Analysis of interatomic Contacts of Structural Units in PDB entry:
8XUT