Analysis of interatomic Contacts of Structural Units in PDB entry:
8XUX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8XUX entry

There are 3 chains in PDB entry 8XUX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 24	ASP 1137
B	THR 24	ASP 1137
C	THR 25	ASP 1137

There are 56 helices in PDB entry 8XUX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	156	161	Right-handed alpha
Helix 2	AA2	A	293	302	Right-handed alpha
Helix 3	AA3	A	336	341	Right-handed alpha
Helix 4	AA4	A	364	370	Right-handed alpha
Helix 5	AA5	A	404	409	Right-handed 310
Helix 6	AA6	A	437	442	Right-handed alpha
Helix 7	AA7	A	614	622	Right-handed alpha
Helix 8	AA8	A	735	741	Right-handed alpha
Helix 9	AA9	A	744	752	Right-handed alpha
Helix 10	AB1	A	753	755	Right-handed 310
Helix 11	AB2	A	758	781	Right-handed alpha
Helix 12	AB3	A	814	825	Right-handed alpha
Helix 13	AB4	A	846	853	Right-handed alpha
Helix 14	AB5	A	864	882	Right-handed alpha
Helix 15	AB6	A	884	888	Right-handed 310
Helix 16	AB7	A	895	906	Right-handed alpha
Helix 17	AB8	A	911	916	Right-handed alpha
Helix 18	AB9	A	917	939	Right-handed alpha
Helix 19	AC1	A	943	963	Right-handed alpha
Helix 20	AC2	A	964	966	Right-handed 310
Helix 21	AC3	A	974	982	Right-handed alpha
Helix 22	AC4	A	983	1031	Right-handed alpha
Helix 23	AC5	B	293	303	Right-handed alpha
Helix 24	AC6	B	382	389	Right-handed 310
Helix 25	AC7	B	415	419	Right-handed 310
Helix 26	AC8	B	735	741	Right-handed alpha
Helix 27	AC9	B	744	753	Right-handed alpha
Helix 28	AD1	B	756	781	Right-handed alpha
Helix 29	AD2	B	814	824	Right-handed alpha
Helix 30	AD3	B	864	882	Right-handed alpha
Helix 31	AD4	B	895	908	Right-handed alpha
Helix 32	AD5	B	911	916	Right-handed alpha
Helix 33	AD6	B	917	939	Right-handed alpha
Helix 34	AD7	B	943	963	Right-handed alpha
Helix 35	AD8	B	964	966	Right-handed 310
Helix 36	AD9	B	974	982	Right-handed alpha
Helix 37	AE1	B	983	1030	Right-handed alpha
Helix 38	AE2	B	1114	1116	Right-handed 310
Helix 39	AE3	C	293	303	Right-handed alpha
Helix 40	AE4	C	336	342	Right-handed alpha
Helix 41	AE5	C	415	421	Right-handed alpha
Helix 42	AE6	C	614	622	Right-handed alpha
Helix 43	AE7	C	735	741	Right-handed alpha
Helix 44	AE8	C	744	752	Right-handed alpha
Helix 45	AE9	C	753	755	Right-handed 310
Helix 46	AF1	C	756	781	Right-handed alpha
Helix 47	AF2	C	814	822	Right-handed alpha
Helix 48	AF3	C	864	882	Right-handed alpha
Helix 49	AF4	C	884	888	Right-handed 310
Helix 50	AF5	C	895	908	Right-handed alpha
Helix 51	AF6	C	910	917	Right-handed alpha
Helix 52	AF7	C	917	939	Right-handed alpha
Helix 53	AF8	C	943	963	Right-handed alpha
Helix 54	AF9	C	964	966	Right-handed 310
Helix 55	AG1	C	974	981	Right-handed alpha
Helix 56	AG2	C	985	1031	Right-handed alpha

There are 49 sheets in PDB entry 8XUX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	30	first strand
Strand 2	A	61	65	anti-parallel
Strand 3	A	264	266	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	51	first strand
Strand 2	A	274	278	anti-parallel
Strand 3	A	284	289	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	55	first strand
Strand 2	A	270	271	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	101	104	first strand
Strand 2	A	239	241	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	121	first strand
Strand 2	A	126	127	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	188	189	first strand
Strand 2	A	208	209	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	196	197	first strand
Strand 2	A	200	201	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	310	318	first strand
Strand 2	A	590	597	anti-parallel
Strand 3	A	607	611	anti-parallel
Strand 4	A	646	649	anti-parallel
Strand 5	A	640	642	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	324	327	first strand
Strand 2	A	537	541	parallel
Strand 3	A	544	552	anti-parallel
Strand 4	A	582	586	anti-parallel
Strand 5	A	571	575	anti-parallel
Strand 6	A	563	565	anti-parallel
Strand 7	C	42	43	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	395	402	first strand
Strand 2	A	505	512	anti-parallel
Strand 3	A	430	434	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	451	453	first strand
Strand 2	A	490	492	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	652	658	first strand
Strand 2	A	689	695	parallel
Strand 3	A	668	673	anti-parallel
Strand 4	A	662	663	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	699	700	first strand
Strand 2	C	785	786	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	709	711	first strand
Strand 2	A	1072	1074	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	715	726	first strand
Strand 2	A	1057	1068	anti-parallel
Strand 3	A	1045	1054	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	732	733	first strand
Strand 2	A	857	858	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	785	788	first strand
Strand 2	B	699	702	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1118	1119	first strand
Strand 2	A	1084	1088	anti-parallel
Strand 3	A	1079	1081	anti-parallel
Strand 4	A	1131	1132	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1092	1095	first strand
Strand 2	A	1100	1103	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	30	first strand
Strand 2	B	61	65	anti-parallel
Strand 3	B	264	266	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	43	first strand
Strand 2	C	563	564	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	55	first strand
Strand 2	B	270	278	anti-parallel
Strand 3	B	284	289	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	92	first strand
Strand 2	B	191	197	anti-parallel
Strand 3	B	200	206	anti-parallel
Strand 4	B	224	228	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	168	172	first strand
Strand 2	B	125	130	anti-parallel
Strand 3	B	118	122	anti-parallel
Strand 4	B	104	105	anti-parallel
Strand 5	B	238	239	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	310	318	first strand
Strand 2	B	590	597	anti-parallel
Strand 3	B	607	611	anti-parallel
Strand 4	B	646	649	anti-parallel
Strand 5	B	640	642	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	323	324	first strand
Strand 2	B	537	541	parallel
Strand 3	B	544	551	anti-parallel
Strand 4	B	582	586	anti-parallel
Strand 5	B	571	575	anti-parallel
Strand 6	B	564	565	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	355	357	first strand
Strand 2	B	394	397	anti-parallel
Strand 3	B	507	513	anti-parallel
Strand 4	B	431	435	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	652	658	first strand
Strand 2	B	690	695	parallel
Strand 3	B	668	672	anti-parallel
Strand 4	B	662	663	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	709	726	first strand
Strand 2	B	1057	1074	anti-parallel
Strand 3	B	1045	1054	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	731	734	first strand
Strand 2	B	856	859	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	785	786	first strand
Strand 2	C	699	700	parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1118	1119	first strand
Strand 2	B	1084	1088	anti-parallel
Strand 3	B	1079	1081	anti-parallel
Strand 4	B	1131	1132	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1092	1095	first strand
Strand 2	B	1100	1103	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	61	64	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	55	first strand
Strand 2	C	270	278	anti-parallel
Strand 3	C	284	289	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	236	237	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	166	170	first strand
Strand 2	C	126	131	anti-parallel
Strand 3	C	117	121	anti-parallel
Strand 4	C	100	104	anti-parallel
Strand 5	C	239	243	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	194	196	first strand
Strand 2	C	200	205	anti-parallel
Strand 3	C	223	229	anti-parallel

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There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	310	318	first strand
Strand 2	C	590	597	anti-parallel
Strand 3	C	607	611	anti-parallel
Strand 4	C	646	649	anti-parallel
Strand 5	C	641	642	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	324	327	first strand
Strand 2	C	536	541	parallel
Strand 3	C	544	552	anti-parallel
Strand 4	C	582	586	anti-parallel
Strand 5	C	574	575	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	355	357	first strand
Strand 2	C	394	396	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	375	378	first strand
Strand 2	C	431	436	anti-parallel
Strand 3	C	505	510	anti-parallel
Strand 4	C	399	402	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	453	first strand
Strand 2	C	490	491	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	652	653	first strand
Strand 2	C	688	694	parallel
Strand 3	C	668	674	anti-parallel
Strand 4	C	662	663	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	709	711	first strand
Strand 2	C	1072	1074	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	715	726	first strand
Strand 2	C	1057	1068	anti-parallel
Strand 3	C	1045	1054	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	731	733	first strand
Strand 2	C	857	859	anti-parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1118	1119	first strand
Strand 2	C	1084	1088	anti-parallel
Strand 3	C	1079	1081	anti-parallel
Strand 4	C	1131	1132	parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1092	1095	first strand
Strand 2	C	1100	1103	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8XUX

Analysis of interatomic Contacts of Structural Units in PDB entry:
8XUX