Analysis of interatomic Contacts of Structural Units in PDB entry:
8XVV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XVV entry

There are 2 chains in PDB entry 8XVV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
 VAL 2276LYS 2491
L
 LYS 19LEU 3830
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are219 helices in PDB entry 8XVV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
H
2333 2346Right-handed alpha
Helix 2
AA2
H
2364 2373Right-handed alpha
Helix 3
AA3
H
2382 2398Right-handed alpha
Helix 4
AA4
H
2408 2415Right-handed alpha
Helix 5
AA5
H
2419 2440Right-handed alpha
Helix 6
AA6
H
2456 2466Right-handed alpha
Helix 7
AA7
H
2474 2491Right-handed alpha
Helix 8
AA8
L
20 27Right-handed alpha
Helix 9
AA9
L
36 51Right-handed alpha
Helix 10
AB1
L
54 57Right-handed 310
Helix 11
AB2
L
58 75Right-handed alpha
Helix 12
AB3
L
84 100Right-handed alpha
Helix 13
AB4
L
106 119Right-handed alpha
Helix 14
AB5
L
127 140Right-handed alpha
Helix 15
AB6
L
141 143Right-handed 310
Helix 16
AB7
L
144 146Right-handed 310
Helix 17
AB8
L
147 172Right-handed alpha
Helix 18
AB9
L
213 228Right-handed alpha
Helix 19
AC1
L
233 244Right-handed alpha
Helix 20
AC2
L
276 294Right-handed alpha
Helix 21
AC3
L
295 299Right-handed 310
Helix 22
AC4
L
306 320Right-handed alpha
Helix 23
AC5
L
324 339Right-handed alpha
Helix 24
AC6
L
341 346Right-handed alpha
Helix 25
AC7
L
351 355Right-handed 310
Helix 26
AC8
L
371 386Right-handed alpha
Helix 27
AC9
L
387 390Right-handed 310
Helix 28
AD1
L
391 407Right-handed alpha
Helix 29
AD2
L
412 434Right-handed alpha
Helix 30
AD3
L
440 469Right-handed alpha
Helix 31
AD4
L
535 565Right-handed alpha
Helix 32
AD5
L
582 600Right-handed alpha
Helix 33
AD6
L
601 603Right-handed 310
Helix 34
AD7
L
623 627Right-handed 310
Helix 35
AD8
L
628 641Right-handed alpha
Helix 36
AD9
L
643 665Right-handed alpha
Helix 37
AE1
L
668 678Right-handed alpha
Helix 38
AE2
L
681 694Right-handed alpha
Helix 39
AE3
L
696 701Right-handed 310
Helix 40
AE4
L
704 724Right-handed alpha
Helix 41
AE5
L
724 747Right-handed alpha
Helix 42
AE6
L
748 750Right-handed 310
Helix 43
AE7
L
754 769Right-handed alpha
Helix 44
AE8
L
774 780Right-handed alpha
Helix 45
AE9
L
782 796Right-handed alpha
Helix 46
AF1
L
799 812Right-handed alpha
Helix 47
AF2
L
820 826Right-handed 310
Helix 48
AF3
L
827 836Right-handed alpha
Helix 49
AF4
L
838 855Right-handed alpha
Helix 50
AF5
L
857 866Right-handed alpha
Helix 51
AF6
L
869 880Right-handed alpha
Helix 52
AF7
L
884 899Right-handed alpha
Helix 53
AF8
L
900 904Right-handed 310
Helix 54
AF9
L
939 952Right-handed alpha
Helix 55
AG1
L
956 974Right-handed alpha
Helix 56
AG2
L
980 989Right-handed alpha
Helix 57
AG3
L
990 996Right-handed alpha
Helix 58
AG4
L
1012 1029Right-handed alpha
Helix 59
AG5
L
1034 1058Right-handed alpha
Helix 60
AG6
L
1073 1077Right-handed 310
Helix 61
AG7
L
1090 1101Right-handed alpha
Helix 62
AG8
L
1106 1127Right-handed alpha
Helix 63
AG9
L
1128 1133Right-handed alpha
Helix 64
AH1
L
1135 1148Right-handed alpha
Helix 65
AH2
L
1149 1151Right-handed 310
Helix 66
AH3
L
1153 1171Right-handed alpha
Helix 67
AH4
L
1172 1195Right-handed alpha
Helix 68
AH5
L
1201 1218Right-handed alpha
Helix 69
AH6
L
1227 1250Right-handed alpha
Helix 70
AH7
L
1253 1271Right-handed alpha
Helix 71
AH8
L
1274 1280Right-handed alpha
Helix 72
AH9
L
1281 1287Right-handed 310
Helix 73
AI1
L
1296 1300Right-handed 310
Helix 74
AI2
L
1301 1316Right-handed alpha
Helix 75
AI3
L
1329 1345Right-handed alpha
Helix 76
AI4
L
1346 1351Right-handed alpha
Helix 77
AI5
L
1353 1358Right-handed alpha
Helix 78
AI6
L
1362 1375Right-handed alpha
Helix 79
AI7
L
1379 1382Right-handed 310
Helix 80
AI8
L
1383 1395Right-handed alpha
Helix 81
AI9
L
1398 1413Right-handed alpha
Helix 82
AJ1
L
1419 1428Right-handed alpha
Helix 83
AJ2
L
1436 1440Right-handed 310
Helix 84
AJ3
L
1441 1455Right-handed alpha
Helix 85
AJ4
L
1456 1459Right-handed 310
Helix 86
AJ5
L
1460 1485Right-handed alpha
Helix 87
AJ6
L
1493 1506Right-handed alpha
Helix 88
AJ7
L
1510 1512Right-handed 310
Helix 89
AJ8
L
1513 1529Right-handed alpha
Helix 90
AJ9
L
1536 1545Right-handed alpha
Helix 91
AK1
L
1547 1557Right-handed alpha
Helix 92
AK2
L
1557 1563Right-handed alpha
Helix 93
AK3
L
1563 1576Right-handed alpha
Helix 94
AK4
L
1579 1588Right-handed alpha
Helix 95
AK5
L
1590 1595Right-handed alpha
Helix 96
AK6
L
1618 1636Right-handed alpha
Helix 97
AK7
L
1642 1655Right-handed alpha
Helix 98
AK8
L
1655 1665Right-handed alpha
Helix 99
AK9
L
1673 1687Right-handed alpha
Helix 100
AL1
L
1691 1698Right-handed alpha
Helix 101
AL2
L
1699 1701Right-handed 310
Helix 102
AL3
L
1709 1721Right-handed alpha
Helix 103
AL4
L
1721 1726Right-handed alpha
Helix 104
AL5
L
1730 1741Right-handed alpha
Helix 105
AL6
L
1741 1749Right-handed alpha
Helix 106
AL7
L
1751 1756Right-handed alpha
Helix 107
AL8
L
1758 1769Right-handed alpha
Helix 108
AL9
L
1785 1796Right-handed alpha
Helix 109
AM1
L
1799 1803Right-handed 310
Helix 110
AM2
L
1809 1824Right-handed alpha
Helix 111
AM3
L
1827 1836Right-handed alpha
Helix 112
AM4
L
1842 1853Right-handed alpha
Helix 113
AM5
L
1858 1876Right-handed alpha
Helix 114
AM6
L
1881 1894Right-handed alpha
Helix 115
AM7
L
1898 1910Right-handed alpha
Helix 116
AM8
L
1911 1916Right-handed alpha
Helix 117
AM9
L
1917 1919Right-handed 310
Helix 118
AN1
L
1920 1934Right-handed alpha
Helix 119
AN2
L
1939 1953Right-handed alpha
Helix 120
AN3
L
1954 1957Right-handed 310
Helix 121
AN4
L
1960 1962Right-handed 310
Helix 122
AN5
L
1963 1977Right-handed alpha
Helix 123
AN6
L
1982 2004Right-handed alpha
Helix 124
AN7
L
2072 2088Right-handed alpha
Helix 125
AN8
L
2089 2094Right-handed alpha
Helix 126
AN9
L
2101 2116Right-handed alpha
Helix 127
AO1
L
2120 2124Right-handed 310
Helix 128
AO2
L
2127 2137Right-handed alpha
Helix 129
AO3
L
2138 2140Right-handed 310
Helix 130
AO4
L
2146 2165Right-handed alpha
Helix 131
AO5
L
2166 2171Right-handed 310
Helix 132
AO6
L
2172 2183Right-handed alpha
Helix 133
AO7
L
2190 2195Right-handed alpha
Helix 134
AO8
L
2197 2202Right-handed alpha
Helix 135
AO9
L
2211 2215Right-handed 310
Helix 136
AP1
L
2223 2232Right-handed alpha
Helix 137
AP2
L
2232 2239Right-handed alpha
Helix 138
AP3
L
2247 2261Right-handed alpha
Helix 139
AP4
L
2268 2285Right-handed alpha
Helix 140
AP5
L
2302 2315Right-handed alpha
Helix 141
AP6
L
2324 2336Right-handed alpha
Helix 142
AP7
L
2342 2359Right-handed alpha
Helix 143
AP8
L
2370 2389Right-handed alpha
Helix 144
AP9
L
2392 2409Right-handed alpha
Helix 145
AQ1
L
2416 2421Right-handed alpha
Helix 146
AQ2
L
2421 2431Right-handed alpha
Helix 147
AQ3
L
2433 2447Right-handed alpha
Helix 148
AQ4
L
2451 2462Right-handed alpha
Helix 149
AQ5
L
2473 2484Right-handed alpha
Helix 150
AQ6
L
2495 2499Right-handed 310
Helix 151
AQ7
L
2502 2508Right-handed 310
Helix 152
AQ8
L
2511 2519Right-handed alpha
Helix 153
AQ9
L
2568 2585Right-handed alpha
Helix 154
AR1
L
2586 2588Right-handed 310
Helix 155
AR2
L
2589 2603Right-handed alpha
Helix 156
AR3
L
2607 2622Right-handed alpha
Helix 157
AR4
L
2623 2640Right-handed alpha
Helix 158
AR5
L
2644 2649Right-handed 310
Helix 159
AR6
L
2652 2663Right-handed alpha
Helix 160
AR7
L
2671 2682Right-handed alpha
Helix 161
AR8
L
2684 2697Right-handed alpha
Helix 162
AR9
L
2723 2737Right-handed alpha
Helix 163
AS1
L
2739 2751Right-handed alpha
Helix 164
AS2
L
2753 2765Right-handed alpha
Helix 165
AS3
L
2767 2789Right-handed alpha
Helix 166
AS4
L
2792 2794Right-handed 310
Helix 167
AS5
L
2795 2813Right-handed alpha
Helix 168
AS6
L
2815 2824Right-handed alpha
Helix 169
AS7
L
2830 2839Right-handed alpha
Helix 170
AS8
L
2840 2842Right-handed 310
Helix 171
AS9
L
2843 2855Right-handed alpha
Helix 172
AT1
L
2859 2861Right-handed 310
Helix 173
AT2
L
2862 2877Right-handed alpha
Helix 174
AT3
L
2886 2903Right-handed alpha
Helix 175
AT4
L
2909 2911Right-handed 310
Helix 176
AT5
L
2912 2936Right-handed alpha
Helix 177
AT6
L
2942 2959Right-handed alpha
Helix 178
AT7
L
2966 2988Right-handed alpha
Helix 179
AT8
L
2999 3022Right-handed alpha
Helix 180
AT9
L
3025 3036Right-handed alpha
Helix 181
AU1
L
3042 3060Right-handed alpha
Helix 182
AU2
L
3065 3079Right-handed alpha
Helix 183
AU3
L
3086 3103Right-handed alpha
Helix 184
AU4
L
3107 3120Right-handed alpha
Helix 185
AU5
L
3123 3142Right-handed alpha
Helix 186
AU6
L
3143 3160Right-handed alpha
Helix 187
AU7
L
3162 3177Right-handed alpha
Helix 188
AU8
L
3178 3180Right-handed 310
Helix 189
AU9
L
3184 3193Right-handed alpha
Helix 190
AV1
L
3198 3204Right-handed 310
Helix 191
AV2
L
3205 3213Right-handed alpha
Helix 192
AV3
L
3217 3230Right-handed alpha
Helix 193
AV4
L
3232 3255Right-handed alpha
Helix 194
AV5
L
3265 3282Right-handed alpha
Helix 195
AV6
L
3282 3296Right-handed alpha
Helix 196
AV7
L
3297 3300Right-handed 310
Helix 197
AV8
L
3302 3327Right-handed alpha
Helix 198
AV9
L
3335 3349Right-handed alpha
Helix 199
AW1
L
3366 3379Right-handed alpha
Helix 200
AW2
L
3381 3393Right-handed alpha
Helix 201
AW3
L
3404 3423Right-handed alpha
Helix 202
AW4
L
3433 3435Right-handed 310
Helix 203
AW5
L
3436 3441Right-handed alpha
Helix 204
AW6
L
3506 3528Right-handed alpha
Helix 205
AW7
L
3564 3576Right-handed alpha
Helix 206
AW8
L
3580 3595Right-handed alpha
Helix 207
AW9
L
3601 3616Right-handed alpha
Helix 208
AX1
L
3620 3630Right-handed alpha
Helix 209
AX2
L
3632 3657Right-handed alpha
Helix 210
AX3
L
3703 3710Right-handed alpha
Helix 211
AX4
L
3717 3732Right-handed alpha
Helix 212
AX5
L
3733 3735Right-handed 310
Helix 213
AX6
L
3736 3759Right-handed alpha
Helix 214
AX7
L
3776 3798Right-handed alpha
Helix 215
AX8
L
3799 3803Right-handed 310
Helix 216
AX9
L
3804 3814Right-handed alpha
Helix 217
AY1
L
3815 3820Right-handed alpha
Helix 218
AY2
L
3821 3822Right-handed 310
Helix 219
AY3
L
3823 3827Right-handed 310
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There are 4 sheets in PDB entry 8XVV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
605 607first strand
Strand 2
L
613 615anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
923 928first strand
Strand 2
L
933 938anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
3429 3431first strand
Strand 2
L
3467 3479anti-parallel
Strand 3
L
3482 3491anti-parallel
Strand 4
L
3496 3503anti-parallel
Strand 5
L
3552 3556anti-parallel
Strand 6
L
3545 3547anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
3561 3563first strand
Strand 2
L
3668 3670anti-parallel
Strand 3
L
3676 3677anti-parallel
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