Analysis of interatomic Contacts of Structural Units in PDB entry:
8XVX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XVX entry

There are 2 chains in PDB entry 8XVX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 THR 3LYS 718
A
 THR 3LYS 718
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 8XVX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
3 31Right-handed alpha
Helix 2
AA2
B
34 39Right-handed alpha
Helix 3
AA3
B
74 79Right-handed alpha
Helix 4
AA4
B
83 91Right-handed alpha
Helix 5
AA5
B
93 126Right-handed alpha
Helix 6
AA6
B
128 136Right-handed alpha
Helix 7
AA7
B
148 152Right-handed 310
Helix 8
AA8
B
155 193Right-handed alpha
Helix 9
AA9
B
216 228Right-handed alpha
Helix 10
AB1
B
242 269Right-handed alpha
Helix 11
AB2
B
280 284Right-handed 310
Helix 12
AB3
B
290 314Right-handed alpha
Helix 13
AB4
B
329 339Right-handed alpha
Helix 14
AB5
B
360 366Right-handed 310
Helix 15
AB6
B
369 398Right-handed alpha
Helix 16
AB7
B
399 408Right-handed 310
Helix 17
AB8
B
411 416Right-handed alpha
Helix 18
AB9
B
419 440Right-handed alpha
Helix 19
AC1
B
440 452Right-handed alpha
Helix 20
AC2
B
456 489Right-handed alpha
Helix 21
AC3
B
489 495Right-handed alpha
Helix 22
AC4
B
500 534Right-handed alpha
Helix 23
AC5
B
534 547Right-handed alpha
Helix 24
AC6
B
555 559Right-handed 310
Helix 25
AC7
B
565 587Right-handed alpha
Helix 26
AC8
B
590 611Right-handed alpha
Helix 27
AC9
B
623 649Right-handed alpha
Helix 28
AD1
B
653 658Right-handed alpha
Helix 29
AD2
B
660 677Right-handed alpha
Helix 30
AD3
B
677 682Right-handed alpha
Helix 31
AD4
B
684 699Right-handed alpha
Helix 32
AD5
B
703 710Right-handed alpha
Helix 33
AD6
B
714 718Right-handed 310
Helix 34
AD7
A
4 31Right-handed alpha
Helix 35
AD8
A
34 39Right-handed alpha
Helix 36
AD9
A
74 79Right-handed alpha
Helix 37
AE1
A
83 91Right-handed alpha
Helix 38
AE2
A
93 126Right-handed alpha
Helix 39
AE3
A
128 136Right-handed alpha
Helix 40
AE4
A
148 152Right-handed 310
Helix 41
AE5
A
155 193Right-handed alpha
Helix 42
AE6
A
216 228Right-handed alpha
Helix 43
AE7
A
242 269Right-handed alpha
Helix 44
AE8
A
280 284Right-handed 310
Helix 45
AE9
A
290 314Right-handed alpha
Helix 46
AF1
A
329 339Right-handed alpha
Helix 47
AF2
A
360 366Right-handed 310
Helix 48
AF3
A
369 399Right-handed alpha
Helix 49
AF4
A
400 408Right-handed 310
Helix 50
AF5
A
411 416Right-handed alpha
Helix 51
AF6
A
419 440Right-handed alpha
Helix 52
AF7
A
440 452Right-handed alpha
Helix 53
AF8
A
456 489Right-handed alpha
Helix 54
AF9
A
489 495Right-handed alpha
Helix 55
AG1
A
500 534Right-handed alpha
Helix 56
AG2
A
534 547Right-handed alpha
Helix 57
AG3
A
555 559Right-handed 310
Helix 58
AG4
A
565 587Right-handed alpha
Helix 59
AG5
A
590 611Right-handed alpha
Helix 60
AG6
A
623 649Right-handed alpha
Helix 61
AG7
A
653 658Right-handed alpha
Helix 62
AG8
A
660 677Right-handed alpha
Helix 63
AG9
A
677 682Right-handed alpha
Helix 64
AH1
A
684 699Right-handed alpha
Helix 65
AH2
A
703 710Right-handed alpha
Helix 66
AH3
A
714 718Right-handed 310
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There are 2 sheets in PDB entry 8XVX. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
233 240first strand
Strand 2
B
319 327anti-parallel
Strand 3
B
203 206anti-parallel
Strand 4
B
350 352anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 240first strand
Strand 2
A
319 327anti-parallel
Strand 3
A
203 206anti-parallel
Strand 4
A
350 352anti-parallel
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