Analysis of interatomic Contacts of Structural Units in PDB entry:
8XVZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XVZ entry

There are 2 chains in PDB entry 8XVZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 3HIS 696
B
 PHE 3HIS 696
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 8XVZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 26Right-handed alpha
Helix 2
AA2
A
36 42Right-handed alpha
Helix 3
AA3
A
56 67Right-handed alpha
Helix 4
AA4
A
69 77Right-handed alpha
Helix 5
AA5
A
78 98Right-handed alpha
Helix 6
AA6
A
102 107Right-handed alpha
Helix 7
AA7
A
151 185Right-handed alpha
Helix 8
AA8
A
207 220Right-handed alpha
Helix 9
AA9
A
233 248Right-handed alpha
Helix 10
AB1
A
291 305Right-handed alpha
Helix 11
AB2
A
317 326Right-handed alpha
Helix 12
AB3
A
355 378Right-handed alpha
Helix 13
AB4
A
379 388Right-handed alpha
Helix 14
AB5
A
390 395Right-handed alpha
Helix 15
AB6
A
396 405Right-handed 310
Helix 16
AB7
A
409 439Right-handed alpha
Helix 17
AB8
A
445 465Right-handed alpha
Helix 18
AB9
A
465 476Right-handed alpha
Helix 19
AC1
A
489 525Right-handed alpha
Helix 20
AC2
A
525 537Right-handed alpha
Helix 21
AC3
A
557 572Right-handed alpha
Helix 22
AC4
A
576 578Right-handed 310
Helix 23
AC5
A
579 596Right-handed alpha
Helix 24
AC6
A
612 637Right-handed alpha
Helix 25
AC7
A
646 662Right-handed alpha
Helix 26
AC8
A
672 679Right-handed alpha
Helix 27
AC9
A
686 694Right-handed alpha
Helix 28
AD1
B
4 27Right-handed alpha
Helix 29
AD2
B
28 33Right-handed 310
Helix 30
AD3
B
69 77Right-handed alpha
Helix 31
AD4
B
78 98Right-handed alpha
Helix 32
AD5
B
102 107Right-handed alpha
Helix 33
AD6
B
148 184Right-handed alpha
Helix 34
AD7
B
207 220Right-handed alpha
Helix 35
AD8
B
237 250Right-handed alpha
Helix 36
AD9
B
288 303Right-handed alpha
Helix 37
AE1
B
317 326Right-handed alpha
Helix 38
AE2
B
343 347Right-handed 310
Helix 39
AE3
B
355 379Right-handed alpha
Helix 40
AE4
B
379 386Right-handed alpha
Helix 41
AE5
B
411 428Right-handed alpha
Helix 42
AE6
B
430 439Right-handed alpha
Helix 43
AE7
B
444 477Right-handed alpha
Helix 44
AE8
B
489 513Right-handed alpha
Helix 45
AE9
B
514 523Right-handed alpha
Helix 46
AF1
B
523 536Right-handed alpha
Helix 47
AF2
B
560 571Right-handed alpha
Helix 48
AF3
B
576 601Right-handed alpha
Helix 49
AF4
B
612 638Right-handed alpha
Helix 50
AF5
B
642 664Right-handed alpha
Helix 51
AF6
B
672 678Right-handed alpha
Helix 52
AF7
B
685 692Right-handed alpha
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There are 2 sheets in PDB entry 8XVZ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 194first strand
Strand 2
A
307 314anti-parallel
Strand 3
A
228 231anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 196first strand
Strand 2
B
311 314anti-parallel
Strand 3
B
226 229anti-parallel
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