Analysis of interatomic Contacts of Structural Units in PDB entry:
8XW0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XW0 entry

There are 2 chains in PDB entry 8XW0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 MET 1HIS 696
A
 MET 1HIS 696
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 8XW0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
2 28Right-handed alpha
Helix 2
AA2
B
30 32Right-handed 310
Helix 3
AA3
B
33 38Right-handed alpha
Helix 4
AA4
B
38 43Right-handed alpha
Helix 5
AA5
B
57 59Right-handed 310
Helix 6
AA6
B
60 67Right-handed alpha
Helix 7
AA7
B
69 77Right-handed alpha
Helix 8
AA8
B
80 113Right-handed alpha
Helix 9
AA9
B
118 123Right-handed alpha
Helix 10
AB1
B
147 184Right-handed alpha
Helix 11
AB2
B
188 191Right-handed 310
Helix 12
AB3
B
207 213Right-handed alpha
Helix 13
AB4
B
215 220Right-handed alpha
Helix 14
AB5
B
233 261Right-handed alpha
Helix 15
AB6
B
269 273Right-handed 310
Helix 16
AB7
B
280 302Right-handed alpha
Helix 17
AB8
B
317 324Right-handed alpha
Helix 18
AB9
B
355 389Right-handed alpha
Helix 19
AC1
B
391 395Right-handed 310
Helix 20
AC2
B
397 401Right-handed 310
Helix 21
AC3
B
406 439Right-handed alpha
Helix 22
AC4
B
444 478Right-handed alpha
Helix 23
AC5
B
485 523Right-handed alpha
Helix 24
AC6
B
523 530Right-handed alpha
Helix 25
AC7
B
543 549Right-handed alpha
Helix 26
AC8
B
557 572Right-handed alpha
Helix 27
AC9
B
578 601Right-handed alpha
Helix 28
AD1
B
612 635Right-handed alpha
Helix 29
AD2
B
643 645Right-handed 310
Helix 30
AD3
B
646 664Right-handed alpha
Helix 31
AD4
B
665 670Right-handed alpha
Helix 32
AD5
A
2 28Right-handed alpha
Helix 33
AD6
A
30 32Right-handed 310
Helix 34
AD7
A
33 38Right-handed alpha
Helix 35
AD8
A
38 43Right-handed alpha
Helix 36
AD9
A
57 59Right-handed 310
Helix 37
AE1
A
60 67Right-handed alpha
Helix 38
AE2
A
69 77Right-handed alpha
Helix 39
AE3
A
80 113Right-handed alpha
Helix 40
AE4
A
118 123Right-handed alpha
Helix 41
AE5
A
147 184Right-handed alpha
Helix 42
AE6
A
188 191Right-handed 310
Helix 43
AE7
A
207 213Right-handed alpha
Helix 44
AE8
A
215 220Right-handed alpha
Helix 45
AE9
A
233 261Right-handed alpha
Helix 46
AF1
A
269 273Right-handed 310
Helix 47
AF2
A
280 302Right-handed alpha
Helix 48
AF3
A
317 324Right-handed alpha
Helix 49
AF4
A
355 389Right-handed alpha
Helix 50
AF5
A
391 395Right-handed 310
Helix 51
AF6
A
397 401Right-handed 310
Helix 52
AF7
A
406 439Right-handed alpha
Helix 53
AF8
A
444 478Right-handed alpha
Helix 54
AF9
A
485 523Right-handed alpha
Helix 55
AG1
A
523 530Right-handed alpha
Helix 56
AG2
A
543 549Right-handed alpha
Helix 57
AG3
A
557 572Right-handed alpha
Helix 58
AG4
A
578 601Right-handed alpha
Helix 59
AG5
A
612 635Right-handed alpha
Helix 60
AG6
A
643 645Right-handed 310
Helix 61
AG7
A
646 664Right-handed alpha
Helix 62
AG8
A
665 670Right-handed alpha
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There are 4 sheets in PDB entry 8XW0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
224 229first strand
Strand 2
B
310 315anti-parallel
Strand 3
B
193 197anti-parallel
Strand 4
B
337 340anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
265 267first strand
Strand 2
B
277 279anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 229first strand
Strand 2
A
310 315anti-parallel
Strand 3
A
193 197anti-parallel
Strand 4
A
337 340anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 267first strand
Strand 2
A
277 279anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il