Analysis of interatomic Contacts of Structural Units in PDB entry:
8XWK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XWK entry

There are 4 chains in PDB entry 8XWK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 6ASN 254
B
 THR 5ASN 254
C
 THR 5ASN 254
D
 THR 5ASN 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 8XWK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 33Right-handed alpha
Helix 2
AA2
A
43 49Right-handed alpha
Helix 3
AA3
A
65 77Right-handed alpha
Helix 4
AA4
A
98 110Right-handed alpha
Helix 5
AA5
A
110 128Right-handed alpha
Helix 6
AA6
A
148 170Right-handed alpha
Helix 7
AA7
A
186 199Right-handed alpha
Helix 8
AA8
A
203 214Right-handed alpha
Helix 9
AA9
A
222 235Right-handed alpha
Helix 10
AB1
A
236 239Right-handed 310
Helix 11
AB2
B
20 33Right-handed alpha
Helix 12
AB3
B
43 50Right-handed alpha
Helix 13
AB4
B
65 77Right-handed alpha
Helix 14
AB5
B
98 110Right-handed alpha
Helix 15
AB6
B
110 127Right-handed alpha
Helix 16
AB7
B
148 170Right-handed alpha
Helix 17
AB8
B
186 201Right-handed alpha
Helix 18
AB9
B
203 214Right-handed alpha
Helix 19
AC1
B
222 235Right-handed alpha
Helix 20
AC2
B
236 239Right-handed 310
Helix 21
AC3
C
20 33Right-handed alpha
Helix 22
AC4
C
43 49Right-handed alpha
Helix 23
AC5
C
65 77Right-handed alpha
Helix 24
AC6
C
98 110Right-handed alpha
Helix 25
AC7
C
110 128Right-handed alpha
Helix 26
AC8
C
148 170Right-handed alpha
Helix 27
AC9
C
186 201Right-handed alpha
Helix 28
AD1
C
203 214Right-handed alpha
Helix 29
AD2
C
222 235Right-handed alpha
Helix 30
AD3
C
236 239Right-handed 310
Helix 31
AD4
D
20 33Right-handed alpha
Helix 32
AD5
D
43 49Right-handed alpha
Helix 33
AD6
D
65 77Right-handed alpha
Helix 34
AD7
D
98 110Right-handed alpha
Helix 35
AD8
D
110 127Right-handed alpha
Helix 36
AD9
D
148 170Right-handed alpha
Helix 37
AE1
D
186 201Right-handed alpha
Helix 38
AE2
D
203 214Right-handed alpha
Helix 39
AE3
D
222 235Right-handed alpha
Helix 40
AE4
D
236 239Right-handed 310
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There are 4 sheets in PDB entry 8XWK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 60first strand
Strand 2
A
36 41parallel
Strand 3
A
12 15parallel
Strand 4
A
81 84parallel
Strand 5
A
130 135parallel
Strand 6
A
174 181parallel
Strand 7
A
245 248parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 60first strand
Strand 2
B
36 41parallel
Strand 3
B
12 15parallel
Strand 4
B
81 84parallel
Strand 5
B
130 135parallel
Strand 6
B
174 181parallel
Strand 7
B
245 248parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
56 60first strand
Strand 2
C
36 41parallel
Strand 3
C
12 15parallel
Strand 4
C
81 84parallel
Strand 5
C
130 135parallel
Strand 6
C
174 181parallel
Strand 7
C
245 248parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
56 60first strand
Strand 2
D
36 41parallel
Strand 3
D
12 15parallel
Strand 4
D
81 84parallel
Strand 5
D
130 135parallel
Strand 6
D
174 181parallel
Strand 7
D
245 248parallel
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