Analysis of interatomic Contacts of Structural Units in PDB entry:
8XWN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XWN entry

There are 3 chains in PDB entry 8XWN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
R
 THR 28ALA 330
D
 PRO 6ASN 78
E
 CYS 14ASN 78
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 8XWN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
R
45 76Right-handed alpha
Helix 2
AA2
R
81 111Right-handed alpha
Helix 3
AA3
R
115 149Right-handed alpha
Helix 4
AA4
R
154 160Right-handed 310
Helix 5
AA5
R
161 177Right-handed alpha
Helix 6
AA6
R
177 183Right-handed alpha
Helix 7
AA7
R
203 212Right-handed alpha
Helix 8
AA8
R
212 218Right-handed alpha
Helix 9
AA9
R
220 241Right-handed alpha
Helix 10
AB1
R
245 279Right-handed alpha
Helix 11
AB2
R
285 304Right-handed alpha
Helix 12
AB3
R
305 315Right-handed alpha
Helix 13
AB4
R
318 329Right-handed alpha
Helix 14
AB5
D
25 27Right-handed 310
Helix 15
AB6
D
62 78Right-handed alpha
Helix 16
AB7
E
25 27Right-handed 310
Helix 17
AB8
E
62 77Right-handed alpha
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There are 2 sheets in PDB entry 8XWN. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
184 187first strand
Strand 2
R
195 198anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
55 58first strand
Strand 2
D
45 50anti-parallel
Strand 3
D
29 35anti-parallel
Strand 4
E
29 35anti-parallel
Strand 5
E
45 50anti-parallel
Strand 6
E
55 58anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il