Analysis of interatomic Contacts of Structural Units in PDB entry:
8XXB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XXB entry

There is 1 chain in PDB entry 8XXB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5ASN 226
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 8XXB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 31Right-handed alpha
Helix 2
AA2
A
46 56Right-handed alpha
Helix 3
AA3
A
73 77Right-handed 310
Helix 4
AA4
A
78 90Right-handed alpha
Helix 5
AA5
A
90 108Right-handed alpha
Helix 6
AA6
A
119 121Right-handed 310
Helix 7
AA7
A
127 150Right-handed alpha
Helix 8
AA8
A
170 176Right-handed alpha
Helix 9
AA9
A
176 187Right-handed alpha
Helix 10
AB1
A
194 206Right-handed alpha
Helix 11
AB2
A
207 211Right-handed 310
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There is 1 sheet (AA1) in PDB entry 8XXB.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 37first strand
Strand 2
A
10 13parallel
Strand 3
A
60 64parallel
Strand 4
A
110 117parallel
Strand 5
A
153 160parallel
Strand 6
A
217 220parallel
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