Analysis of interatomic Contacts of Structural Units in PDB entry:
8XXC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8XXC entry

There are 8 chains in PDB entry 8XXC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	LYS 436
B	SER 2	ILE 435
C	SER 2	LYS 436
D	SER 2	LYS 436
E	SER 2	ILE 435
F	SER 2	ILE 435
G	SER 2	ILE 435
H	SER 2	ILE 435

There are182 helices in PDB entry 8XXC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	3	26	Right-handed alpha
Helix 2	AA2	A	36	41	Right-handed alpha
Helix 3	AA3	A	68	76	Right-handed alpha
Helix 4	AA4	A	86	97	Right-handed alpha
Helix 5	AA5	A	101	114	Right-handed alpha
Helix 6	AA6	A	119	129	Right-handed alpha
Helix 7	AA7	A	134	146	Right-handed alpha
Helix 8	AA8	A	147	149	Right-handed 310
Helix 9	AA9	A	150	158	Right-handed alpha
Helix 10	AB1	A	166	194	Right-handed alpha
Helix 11	AB2	A	206	216	Right-handed alpha
Helix 12	AB3	A	220	232	Right-handed alpha
Helix 13	AB4	A	239	251	Right-handed alpha
Helix 14	AB5	A	254	267	Right-handed alpha
Helix 15	AB6	A	273	289	Right-handed alpha
Helix 16	AB7	A	296	310	Right-handed alpha
Helix 17	AB8	A	326	340	Right-handed alpha
Helix 18	AB9	A	343	364	Right-handed alpha
Helix 19	AC1	A	373	384	Right-handed alpha
Helix 20	AC2	A	388	390	Right-handed 310
Helix 21	AC3	A	391	414	Right-handed alpha
Helix 22	AC4	A	425	433	Right-handed alpha
Helix 23	AC5	B	3	26	Right-handed alpha
Helix 24	AC6	B	36	41	Right-handed alpha
Helix 25	AC7	B	68	76	Right-handed alpha
Helix 26	AC8	B	86	97	Right-handed alpha
Helix 27	AC9	B	101	116	Right-handed alpha
Helix 28	AD1	B	119	129	Right-handed alpha
Helix 29	AD2	B	134	146	Right-handed alpha
Helix 30	AD3	B	147	149	Right-handed 310
Helix 31	AD4	B	150	158	Right-handed alpha
Helix 32	AD5	B	166	194	Right-handed alpha
Helix 33	AD6	B	206	216	Right-handed alpha
Helix 34	AD7	B	220	232	Right-handed alpha
Helix 35	AD8	B	239	251	Right-handed alpha
Helix 36	AD9	B	254	267	Right-handed alpha
Helix 37	AE1	B	273	289	Right-handed alpha
Helix 38	AE2	B	296	311	Right-handed alpha
Helix 39	AE3	B	326	340	Right-handed alpha
Helix 40	AE4	B	343	363	Right-handed alpha
Helix 41	AE5	B	372	375	Right-handed 310
Helix 42	AE6	B	376	384	Right-handed alpha
Helix 43	AE7	B	388	390	Right-handed 310
Helix 44	AE8	B	391	414	Right-handed alpha
Helix 45	AE9	B	425	434	Right-handed alpha
Helix 46	AF1	C	3	25	Right-handed alpha
Helix 47	AF2	C	36	41	Right-handed alpha
Helix 48	AF3	C	69	76	Right-handed alpha
Helix 49	AF4	C	86	97	Right-handed alpha
Helix 50	AF5	C	101	116	Right-handed alpha
Helix 51	AF6	C	119	129	Right-handed alpha
Helix 52	AF7	C	134	146	Right-handed alpha
Helix 53	AF8	C	147	149	Right-handed 310
Helix 54	AF9	C	150	158	Right-handed alpha
Helix 55	AG1	C	166	194	Right-handed alpha
Helix 56	AG2	C	206	216	Right-handed alpha
Helix 57	AG3	C	220	232	Right-handed alpha
Helix 58	AG4	C	239	251	Right-handed alpha
Helix 59	AG5	C	254	267	Right-handed alpha
Helix 60	AG6	C	273	289	Right-handed alpha
Helix 61	AG7	C	296	310	Right-handed alpha
Helix 62	AG8	C	326	340	Right-handed alpha
Helix 63	AG9	C	343	364	Right-handed alpha
Helix 64	AH1	C	372	375	Right-handed 310
Helix 65	AH2	C	376	384	Right-handed alpha
Helix 66	AH3	C	388	390	Right-handed 310
Helix 67	AH4	C	391	414	Right-handed alpha
Helix 68	AH5	C	425	433	Right-handed alpha
Helix 69	AH6	D	3	27	Right-handed alpha
Helix 70	AH7	D	36	41	Right-handed alpha
Helix 71	AH8	D	69	76	Right-handed alpha
Helix 72	AH9	D	86	97	Right-handed alpha
Helix 73	AI1	D	101	116	Right-handed alpha
Helix 74	AI2	D	119	129	Right-handed alpha
Helix 75	AI3	D	134	146	Right-handed alpha
Helix 76	AI4	D	147	149	Right-handed 310
Helix 77	AI5	D	150	158	Right-handed alpha
Helix 78	AI6	D	166	194	Right-handed alpha
Helix 79	AI7	D	206	216	Right-handed alpha
Helix 80	AI8	D	220	232	Right-handed alpha
Helix 81	AI9	D	239	250	Right-handed alpha
Helix 82	AJ1	D	254	267	Right-handed alpha
Helix 83	AJ2	D	273	289	Right-handed alpha
Helix 84	AJ3	D	296	310	Right-handed alpha
Helix 85	AJ4	D	326	340	Right-handed alpha
Helix 86	AJ5	D	343	364	Right-handed alpha
Helix 87	AJ6	D	372	375	Right-handed 310
Helix 88	AJ7	D	376	385	Right-handed alpha
Helix 89	AJ8	D	388	390	Right-handed 310
Helix 90	AJ9	D	391	414	Right-handed alpha
Helix 91	AK1	D	425	433	Right-handed alpha
Helix 92	AK2	E	3	25	Right-handed alpha
Helix 93	AK3	E	36	41	Right-handed alpha
Helix 94	AK4	E	68	76	Right-handed alpha
Helix 95	AK5	E	86	97	Right-handed alpha
Helix 96	AK6	E	101	114	Right-handed alpha
Helix 97	AK7	E	119	129	Right-handed alpha
Helix 98	AK8	E	134	146	Right-handed alpha
Helix 99	AK9	E	147	149	Right-handed 310
Helix 100	AL1	E	150	158	Right-handed alpha
Helix 101	AL2	E	166	194	Right-handed alpha
Helix 102	AL3	E	206	216	Right-handed alpha
Helix 103	AL4	E	220	233	Right-handed alpha
Helix 104	AL5	E	239	250	Right-handed alpha
Helix 105	AL6	E	254	267	Right-handed alpha
Helix 106	AL7	E	273	289	Right-handed alpha
Helix 107	AL8	E	296	309	Right-handed alpha
Helix 108	AL9	E	326	340	Right-handed alpha
Helix 109	AM1	E	343	364	Right-handed alpha
Helix 110	AM2	E	372	375	Right-handed 310
Helix 111	AM3	E	376	384	Right-handed alpha
Helix 112	AM4	E	388	390	Right-handed 310
Helix 113	AM5	E	391	414	Right-handed alpha
Helix 114	AM6	E	425	432	Right-handed alpha
Helix 115	AM7	F	3	26	Right-handed alpha
Helix 116	AM8	F	36	41	Right-handed alpha
Helix 117	AM9	F	68	76	Right-handed alpha
Helix 118	AN1	F	86	97	Right-handed alpha
Helix 119	AN2	F	101	116	Right-handed alpha
Helix 120	AN3	F	119	129	Right-handed alpha
Helix 121	AN4	F	134	146	Right-handed alpha
Helix 122	AN5	F	147	149	Right-handed 310
Helix 123	AN6	F	150	158	Right-handed alpha
Helix 124	AN7	F	166	194	Right-handed alpha
Helix 125	AN8	F	206	216	Right-handed alpha
Helix 126	AN9	F	220	232	Right-handed alpha
Helix 127	AO1	F	239	251	Right-handed alpha
Helix 128	AO2	F	254	267	Right-handed alpha
Helix 129	AO3	F	273	289	Right-handed alpha
Helix 130	AO4	F	296	310	Right-handed alpha
Helix 131	AO5	F	326	340	Right-handed alpha
Helix 132	AO6	F	343	364	Right-handed alpha
Helix 133	AO7	F	373	384	Right-handed alpha
Helix 134	AO8	F	388	390	Right-handed 310
Helix 135	AO9	F	391	414	Right-handed alpha
Helix 136	AP1	F	425	432	Right-handed alpha
Helix 137	AP2	G	3	26	Right-handed alpha
Helix 138	AP3	G	36	41	Right-handed alpha
Helix 139	AP4	G	68	76	Right-handed alpha
Helix 140	AP5	G	86	97	Right-handed alpha
Helix 141	AP6	G	101	116	Right-handed alpha
Helix 142	AP7	G	119	129	Right-handed alpha
Helix 143	AP8	G	134	146	Right-handed alpha
Helix 144	AP9	G	147	149	Right-handed 310
Helix 145	AQ1	G	150	158	Right-handed alpha
Helix 146	AQ2	G	166	194	Right-handed alpha
Helix 147	AQ3	G	206	216	Right-handed alpha
Helix 148	AQ4	G	220	233	Right-handed alpha
Helix 149	AQ5	G	239	251	Right-handed alpha
Helix 150	AQ6	G	254	267	Right-handed alpha
Helix 151	AQ7	G	273	289	Right-handed alpha
Helix 152	AQ8	G	296	310	Right-handed alpha
Helix 153	AQ9	G	326	340	Right-handed alpha
Helix 154	AR1	G	343	364	Right-handed alpha
Helix 155	AR2	G	372	375	Right-handed 310
Helix 156	AR3	G	376	384	Right-handed alpha
Helix 157	AR4	G	388	390	Right-handed 310
Helix 158	AR5	G	391	414	Right-handed alpha
Helix 159	AR6	G	425	434	Right-handed alpha
Helix 160	AR7	H	3	27	Right-handed alpha
Helix 161	AR8	H	36	41	Right-handed alpha
Helix 162	AR9	H	68	76	Right-handed alpha
Helix 163	AS1	H	86	97	Right-handed alpha
Helix 164	AS2	H	101	116	Right-handed alpha
Helix 165	AS3	H	119	129	Right-handed alpha
Helix 166	AS4	H	134	146	Right-handed alpha
Helix 167	AS5	H	147	149	Right-handed 310
Helix 168	AS6	H	150	158	Right-handed alpha
Helix 169	AS7	H	166	194	Right-handed alpha
Helix 170	AS8	H	206	216	Right-handed alpha
Helix 171	AS9	H	220	232	Right-handed alpha
Helix 172	AT1	H	239	251	Right-handed alpha
Helix 173	AT2	H	254	267	Right-handed alpha
Helix 174	AT3	H	273	289	Right-handed alpha
Helix 175	AT4	H	296	310	Right-handed alpha
Helix 176	AT5	H	326	340	Right-handed alpha
Helix 177	AT6	H	343	364	Right-handed alpha
Helix 178	AT7	H	372	375	Right-handed 310
Helix 179	AT8	H	376	384	Right-handed alpha
Helix 180	AT9	H	388	390	Right-handed 310
Helix 181	AU1	H	391	414	Right-handed alpha
Helix 182	AU2	H	425	434	Right-handed alpha

There are 20 sheets in PDB entry 8XXC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	30	35	first strand
Strand 2	B	30	35	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	50	first strand
Strand 2	B	422	424	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	57	first strand
Strand 2	A	61	64	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	422	424	first strand
Strand 2	B	47	50	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	57	first strand
Strand 2	B	61	64	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	30	35	first strand
Strand 2	D	30	35	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	50	first strand
Strand 2	D	422	424	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	57	first strand
Strand 2	C	61	64	anti-parallel
Strand 3	C	67	68	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	422	424	first strand
Strand 2	D	47	50	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	54	56	first strand
Strand 2	D	62	64	anti-parallel
Strand 3	D	67	68	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	30	35	first strand
Strand 2	F	30	35	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	47	50	first strand
Strand 2	F	422	424	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	54	57	first strand
Strand 2	E	61	64	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	422	424	first strand
Strand 2	F	47	50	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	54	57	first strand
Strand 2	F	61	64	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	30	35	first strand
Strand 2	H	30	35	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	47	50	first strand
Strand 2	H	422	424	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	54	57	first strand
Strand 2	G	61	64	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	422	424	first strand
Strand 2	H	47	50	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	54	57	first strand
Strand 2	H	61	64	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8XXC

Analysis of interatomic Contacts of Structural Units in PDB entry:
8XXC