Analysis of interatomic Contacts of Structural Units in PDB entry:
8XXP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XXP entry

There are 8 chains in PDB entry 8XXP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1LYS 1441
B
ILE 8ALA 1242
C
MET 1ALA 359
D
MET 1ILE 205
E
GLU 41ASP 147
F
MET 1ILE 154
G
MET 1GLY 105
H
MET 1TYR 80
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are144 helices in PDB entry 8XXP. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
17 25Right-handed alpha
Helix 2
AA2
A
47 51Right-handed 310
Helix 3
AA3
A
87 96Right-handed alpha
Helix 4
AA4
A
116 127Right-handed alpha
Helix 5
AA5
A
166 176Right-handed alpha
Helix 6
AA6
A
178 185Right-handed alpha
Helix 7
AA7
A
188 195Right-handed 310
Helix 8
AA8
A
226 240Right-handed alpha
Helix 9
AA9
A
253 273Right-handed alpha
Helix 10
AB1
A
299 303Right-handed 310
Helix 11
AB2
A
342 348Right-handed alpha
Helix 12
AB3
A
358 369Right-handed alpha
Helix 13
AB4
A
389 393Right-handed 310
Helix 14
AB5
A
424 426Right-handed 310
Helix 15
AB6
A
450 455Right-handed alpha
Helix 16
AB7
A
470 480Right-handed alpha
Helix 17
AB8
A
482 487Right-handed 310
Helix 18
AB9
A
501 512Right-handed alpha
Helix 19
AC1
A
524 531Right-handed alpha
Helix 20
AC2
A
552 561Right-handed alpha
Helix 21
AC3
A
604 609Right-handed alpha
Helix 22
AC4
A
615 625Right-handed alpha
Helix 23
AC5
A
625 648Right-handed alpha
Helix 24
AC6
A
652 657Right-handed 310
Helix 25
AC7
A
659 686Right-handed alpha
Helix 26
AC8
A
696 709Right-handed alpha
Helix 27
AC9
A
712 714Right-handed 310
Helix 28
AD1
A
715 723Right-handed alpha
Helix 29
AD2
A
728 736Right-handed alpha
Helix 30
AD3
A
741 750Right-handed alpha
Helix 31
AD4
A
781 785Right-handed 310
Helix 32
AD5
A
797 834Right-handed alpha
Helix 33
AD6
A
861 865Right-handed 310
Helix 34
AD7
A
871 874Right-handed 310
Helix 35
AD8
A
876 885Right-handed alpha
Helix 36
AD9
A
891 918Right-handed alpha
Helix 37
AE1
A
933 945Right-handed alpha
Helix 38
AE2
A
953 970Right-handed alpha
Helix 39
AE3
A
971 976Right-handed 310
Helix 40
AE4
A
977 984Right-handed alpha
Helix 41
AE5
A
988 995Right-handed alpha
Helix 42
AE6
A
995 1006Right-handed alpha
Helix 43
AE7
A
1007 1011Right-handed 310
Helix 44
AE8
A
1015 1032Right-handed alpha
Helix 45
AE9
A
1040 1059Right-handed alpha
Helix 46
AF1
A
1074 1082Right-handed alpha
Helix 47
AF2
A
1102 1105Right-handed 310
Helix 48
AF3
A
1106 1118Right-handed alpha
Helix 49
AF4
A
1146 1150Right-handed 310
Helix 50
AF5
A
1151 1162Right-handed alpha
Helix 51
AF6
A
1181 1188Right-handed alpha
Helix 52
AF7
A
1191 1203Right-handed alpha
Helix 53
AF8
A
1229 1233Right-handed alpha
Helix 54
AF9
A
1234 1239Right-handed 310
Helix 55
AG1
A
1242 1256Right-handed alpha
Helix 56
AG2
A
1299 1306Right-handed alpha
Helix 57
AG3
A
1310 1314Right-handed 310
Helix 58
AG4
A
1318 1327Right-handed alpha
Helix 59
AG5
A
1327 1344Right-handed alpha
Helix 60
AG6
A
1345 1347Right-handed 310
Helix 61
AG7
A
1349 1361Right-handed alpha
Helix 62
AG8
A
1370 1378Right-handed alpha
Helix 63
AG9
A
1381 1389Right-handed alpha
Helix 64
AH1
A
1390 1402Right-handed alpha
Helix 65
AH2
A
1410 1416Right-handed alpha
Helix 66
AH3
A
1422 1426Right-handed 310
Helix 67
AH4
A
1432 1440Right-handed alpha
Helix 68
AH5
B
12 16Right-handed 310
Helix 69
AH6
B
22 38Right-handed alpha
Helix 70
AH7
B
40 53Right-handed alpha
Helix 71
AH8
B
53 63Right-handed alpha
Helix 72
AH9
B
113 121Right-handed alpha
Helix 73
AI1
B
175 183Right-handed alpha
Helix 74
AI2
B
272 279Right-handed alpha
Helix 75
AI3
B
283 293Right-handed alpha
Helix 76
AI4
B
299 315Right-handed alpha
Helix 77
AI5
B
328 340Right-handed alpha
Helix 78
AI6
B
359 372Right-handed alpha
Helix 79
AI7
B
373 377Right-handed 310
Helix 80
AI8
B
379 381Right-handed 310
Helix 81
AI9
B
382 402Right-handed alpha
Helix 82
AJ1
B
412 414Right-handed 310
Helix 83
AJ2
B
421 437Right-handed alpha
Helix 84
AJ3
B
477 488Right-handed alpha
Helix 85
AJ4
B
513 521Right-handed alpha
Helix 86
AJ5
B
536 543Right-handed alpha
Helix 87
AJ6
B
582 592Right-handed alpha
Helix 88
AJ7
B
603 610Right-handed alpha
Helix 89
AJ8
B
627 642Right-handed alpha
Helix 90
AJ9
B
679 697Right-handed alpha
Helix 91
AK1
B
700 705Right-handed 310
Helix 92
AK2
B
715 724Right-handed alpha
Helix 93
AK3
B
728 735Right-handed alpha
Helix 94
AK4
B
742 747Right-handed alpha
Helix 95
AK5
B
754 761Right-handed alpha
Helix 96
AK6
B
774 779Right-handed 310
Helix 97
AK7
B
780 786Right-handed alpha
Helix 98
AK8
B
788 792Right-handed 310
Helix 99
AK9
B
793 804Right-handed alpha
Helix 100
AL1
B
805 807Right-handed 310
Helix 101
AL2
B
836 841Right-handed 310
Helix 102
AL3
B
869 874Right-handed alpha
Helix 103
AL4
B
903 907Right-handed 310
Helix 104
AL5
B
1011 1015Right-handed 310
Helix 105
AL6
B
1030 1033Right-handed 310
Helix 106
AL7
B
1038 1055Right-handed alpha
Helix 107
AL8
B
1067 1078Right-handed alpha
Helix 108
AL9
B
1114 1119Right-handed alpha
Helix 109
AM1
B
1148 1158Right-handed alpha
Helix 110
AM2
B
1162 1169Right-handed alpha
Helix 111
AM3
B
1201 1205Right-handed 310
Helix 112
AM4
B
1214 1226Right-handed alpha
Helix 113
AM5
C
19 31Right-handed alpha
Helix 114
AM6
C
51 65Right-handed alpha
Helix 115
AM7
C
89 99Right-handed alpha
Helix 116
AM8
C
173 177Right-handed 310
Helix 117
AM9
C
230 259Right-handed alpha
Helix 118
AN1
C
260 262Right-handed 310
Helix 119
AN2
C
287 302Right-handed alpha
Helix 120
AN3
C
328 359Right-handed alpha
Helix 121
AN4
D
2 17Right-handed alpha
Helix 122
AN5
D
27 39Right-handed alpha
Helix 123
AN6
D
67 80Right-handed alpha
Helix 124
AN7
D
93 98Right-handed alpha
Helix 125
AN8
D
99 113Right-handed alpha
Helix 126
AN9
D
122 127Right-handed 310
Helix 127
AO1
D
129 133Right-handed 310
Helix 128
AO2
D
143 155Right-handed alpha
Helix 129
AO3
D
157 161Right-handed 310
Helix 130
AO4
D
168 175Right-handed alpha
Helix 131
AO5
E
44 49Right-handed alpha
Helix 132
AO6
E
61 65Right-handed 310
Helix 133
AO7
E
72 90Right-handed alpha
Helix 134
AO8
E
101 112Right-handed alpha
Helix 135
AO9
F
15 20Right-handed alpha
Helix 136
AP1
F
22 36Right-handed alpha
Helix 137
AP2
G
33 36Right-handed 310
Helix 138
AP3
G
53 60Right-handed alpha
Helix 139
AP4
G
61 63Right-handed 310
Helix 140
AP5
H
13 16Right-handed 310
Helix 141
AP6
H
17 33Right-handed alpha
Helix 142
AP7
H
51 58Right-handed alpha
Helix 143
AP8
H
63 73Right-handed alpha
Helix 144
AP9
H
75 80Right-handed alpha
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There are 42 sheets in PDB entry 8XXP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
4 5first strand
Strand 2
B
1208 1213parallel
Strand 3
B
1174 1179anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1404 1406first strand
Strand 2
A
10 15anti-parallel
Strand 3
B
1228 1232anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
35 36first strand
Strand 2
A
39 40anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
74 83first strand
Strand 2
A
197 203anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
143 146first strand
Strand 2
A
154 158anti-parallel
Strand 3
A
161 165anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
317 318first strand
Strand 2
B
1146 1147anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1120 1121first strand
Strand 2
A
323 329anti-parallel
Strand 3
A
462 466anti-parallel
Strand 4
A
414 418anti-parallel
Strand 5
A
428 436anti-parallel
Strand 6
A
337 341parallel
Strand 7
A
444 446anti-parallel
Strand 8
A
323 329parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
349 353first strand
Strand 2
A
404 408anti-parallel
Strand 3
A
376 381anti-parallel
Strand 4
A
386 388anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
514 515first strand
Strand 2
A
518 519anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
521 523first strand
Strand 2
A
549 551anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
567 569first strand
Strand 2
A
591 594anti-parallel
Strand 3
A
597 600anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
753 754first strand
Strand 2
A
787 788anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
836 838first strand
Strand 2
A
844 846anti-parallel
Strand 3
A
849 852anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
866 869first strand
Strand 2
A
927 930anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1267 1278first strand
Strand 2
A
1284 1296anti-parallel
Strand 3
A
1093 1097anti-parallel
Strand 4
A
1315 1316anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1120 1121first strand
Strand 2
A
1258 1260anti-parallel
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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1206 1210first strand
Strand 2
A
1222 1228anti-parallel
Strand 3
A
1171 1180anti-parallel
Strand 4
A
1126 1133anti-parallel
Strand 5
G
38 43anti-parallel
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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1428 1431first strand
Strand 2
E
117 125anti-parallel
Strand 3
E
130 136anti-parallel
Strand 4
E
55 59parallel
Strand 5
B
1238 1239parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
95 96first strand
Strand 2
B
125 129anti-parallel
Strand 3
B
159 161anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
100 101first strand
Strand 2
B
110 111anti-parallel
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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
193 195first strand
Strand 2
B
198 200anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
416 419first strand
Strand 2
B
204 208anti-parallel
Strand 3
B
523 525parallel
Strand 4
B
568 570anti-parallel
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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
213 216first strand
Strand 2
B
226 234anti-parallel
Strand 3
B
244 251anti-parallel
Strand 4
B
256 261anti-parallel
Strand 5
B
270 271anti-parallel
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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
576 577first strand
Strand 2
B
669 678anti-parallel
Strand 3
B
738 741anti-parallel
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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
710 712first strand
Strand 2
B
669 678anti-parallel
Strand 3
B
771 772anti-parallel
Strand 4
B
751 752parallel
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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
596 597first strand
Strand 2
B
620 625anti-parallel
Strand 3
B
613 617anti-parallel
Strand 4
B
659 663parallel
Strand 5
B
650 654anti-parallel
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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
823 826first strand
Strand 2
B
879 885anti-parallel
Strand 3
B
982 988anti-parallel
Strand 4
B
963 968anti-parallel
Strand 5
B
925 927anti-parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
834 835first strand
Strand 2
B
1058 1059parallel
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There are 8 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1085 1086first strand
Strand 2
B
1101 1110anti-parallel
Strand 3
B
995 998anti-parallel
Strand 4
B
1003 1010anti-parallel
Strand 5
B
864 868parallel
Strand 6
B
1026 1028anti-parallel
Strand 7
B
847 853parallel
Strand 8
B
1101 1110anti-parallel
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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
932 933first strand
Strand 2
B
955 956anti-parallel
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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1017 1018first strand
Strand 2
B
1088 1089anti-parallel
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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1188 1190first strand
Strand 2
B
1195 1197anti-parallel
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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
5 12first strand
Strand 2
C
38 47anti-parallel
Strand 3
C
217 227anti-parallel
Strand 4
C
180 186anti-parallel
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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
68 73first strand
Strand 2
C
157 168anti-parallel
Strand 3
C
78 79anti-parallel
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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
68 73first strand
Strand 2
C
157 168anti-parallel
Strand 3
C
111 116anti-parallel
Strand 4
C
130 132anti-parallel
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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
123 126first strand
Strand 2
C
148 152anti-parallel
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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
267 271first strand
Strand 2
C
277 284anti-parallel
Strand 3
C
318 325anti-parallel
Strand 4
C
307 311anti-parallel
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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
20 21first strand
Strand 2
D
40 46anti-parallel
Strand 3
D
52 58anti-parallel
Strand 4
D
87 91parallel
Strand 5
D
117 121parallel
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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
138 142first strand
Strand 2
D
181 186anti-parallel
Strand 3
D
194 201anti-parallel
Strand 4
D
162 165parallel
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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
2 10first strand
Strand 2
F
71 79anti-parallel
Strand 3
F
47 54anti-parallel
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There are 6 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
86 91first strand
Strand 2
F
102 104anti-parallel
Strand 3
F
110 113anti-parallel
Strand 4
F
148 153parallel
Strand 5
F
129 134anti-parallel
Strand 6
F
86 91anti-parallel
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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
68 70first strand
Strand 2
G
80 86anti-parallel
Strand 3
G
91 95anti-parallel
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