Analysis of interatomic Contacts of Structural Units in PDB entry:
8XY8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XY8 entry

There is 1 chain in PDB entry 8XY8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3GLY 362
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8XY8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 24Right-handed alpha
Helix 2
AA2
A
65 80Right-handed alpha
Helix 3
AA3
A
88 92Right-handed 310
Helix 4
AA4
A
93 97Right-handed 310
Helix 5
AA5
A
100 104Right-handed 310
Helix 6
AA6
A
105 110Right-handed alpha
Helix 7
AA7
A
127 138Right-handed alpha
Helix 8
AA8
A
151 166Right-handed alpha
Helix 9
AA9
A
169 177Right-handed alpha
Helix 10
AB1
A
177 183Right-handed alpha
Helix 11
AB2
A
192 199Right-handed 310
Helix 12
AB3
A
217 222Right-handed alpha
Helix 13
AB4
A
227 238Right-handed alpha
Helix 14
AB5
A
245 254Right-handed alpha
Helix 15
AB6
A
255 257Right-handed 310
Helix 16
AB7
A
279 287Right-handed alpha
Helix 17
AB8
A
288 294Right-handed alpha
Helix 18
AB9
A
330 333Right-handed 310
Helix 19
AC1
A
345 362Right-handed alpha
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There are 4 sheets in PDB entry 8XY8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 44first strand
Strand 2
A
27 34anti-parallel
Strand 3
A
334 340anti-parallel
Strand 4
A
323 329anti-parallel
Strand 5
A
311 318anti-parallel
Strand 6
A
272 275anti-parallel
Strand 7
A
265 267anti-parallel
Strand 8
A
258 262anti-parallel
Strand 9
A
299 305anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
225 226anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
296 297anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 203first strand
Strand 2
A
209 210anti-parallel
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