Analysis of interatomic Contacts of Structural Units in PDB entry:
8XYX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XYX entry

There are 4 chains in PDB entry 8XYX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 137LEU 372
B
 PRO 44GLU 324
C
 THR 152ALA 182
D
 PRO 11LYS 137
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8XYX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
137 165Right-handed alpha
Helix 2
AA2
A
187 200Right-handed alpha
Helix 3
AA3
A
232 237Right-handed alpha
Helix 4
AA4
A
239 244Right-handed alpha
Helix 5
AA5
A
254 256Right-handed 310
Helix 6
AA6
A
257 268Right-handed alpha
Helix 7
AA7
A
336 346Right-handed alpha
Helix 8
AA8
B
47 52Right-handed alpha
Helix 9
AA9
B
54 59Right-handed alpha
Helix 10
AB1
B
84 88Right-handed 310
Helix 11
AB2
B
110 117Right-handed alpha
Helix 12
AB3
B
137 147Right-handed alpha
Helix 13
AB4
B
164 174Right-handed alpha
Helix 14
AB5
B
201 207Right-handed alpha
Helix 15
AB6
B
216 220Right-handed 310
Helix 16
AB7
B
272 287Right-handed alpha
Helix 17
AB8
C
153 157Right-handed alpha
Helix 18
AB9
C
162 182Right-handed alpha
Helix 19
AC1
D
13 26Right-handed alpha
Helix 20
AC2
D
38 44Right-handed alpha
Helix 21
AC3
D
51 65Right-handed alpha
Helix 22
AC4
D
69 76Right-handed alpha
Helix 23
AC5
D
83 96Right-handed alpha
Helix 24
AC6
D
109 128Right-handed alpha
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There are 2 sheets in PDB entry 8XYX. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 179first strand
Strand 2
A
365 368parallel
Strand 3
A
351 354parallel
Strand 4
A
205 208parallel
Strand 5
A
247 253parallel
Strand 6
A
299 307anti-parallel
Strand 7
A
274 281anti-parallel
Strand 8
A
323 327parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 76first strand
Strand 2
B
317 322parallel
Strand 3
B
302 304parallel
Strand 4
B
93 96parallel
Strand 5
B
128 133parallel
Strand 6
B
233 240anti-parallel
Strand 7
B
151 162anti-parallel
Strand 8
B
258 263parallel
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