Analysis of interatomic Contacts of Structural Units in PDB entry:
8XZ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XZ0 entry

There are 2 chains in PDB entry 8XZ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3ARG 295
B
 ASP 1260THR 1273
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 8XZ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 38Right-handed alpha
Helix 2
AA2
A
41 43Right-handed 310
Helix 3
AA3
A
88 93Right-handed alpha
Helix 4
AA4
A
95 112Right-handed alpha
Helix 5
AA5
A
118 135Right-handed alpha
Helix 6
AA6
A
154 161Right-handed alpha
Helix 7
AA7
A
164 177Right-handed alpha
Helix 8
AA8
A
178 180Right-handed 310
Helix 9
AA9
A
183 196Right-handed alpha
Helix 10
AB1
A
273 295Right-handed alpha
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There are 2 sheets in PDB entry 8XZ0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 58first strand
Strand 2
A
45 49anti-parallel
Strand 3
A
76 82anti-parallel
Strand 4
A
5 11parallel
Strand 5
A
14 20anti-parallel
Strand 6
B
1264 1270anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 241first strand
Strand 2
A
224 229anti-parallel
Strand 3
A
215 221anti-parallel
Strand 4
A
204 210anti-parallel
Strand 5
A
267 270anti-parallel
Strand 6
A
254 259anti-parallel
Strand 7
A
245 251anti-parallel
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