Analysis of interatomic Contacts of Structural Units in PDB entry:
8XZ8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8XZ8 entry

There are 4 chains in PDB entry 8XZ8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 19	ASP 614
B	THR 23	GLU 1144
C	THR 23	GLU 1144
D	THR 23	GLU 1144

There are 96 helices in PDB entry 8XZ8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	53	Right-handed alpha
Helix 2	AA2	A	55	81	Right-handed alpha
Helix 3	AA3	A	90	101	Right-handed alpha
Helix 4	AA4	A	103	108	Right-handed 310
Helix 5	AA5	A	109	129	Right-handed alpha
Helix 6	AA6	A	147	154	Right-handed alpha
Helix 7	AA7	A	156	193	Right-handed alpha
Helix 8	AA8	A	197	204	Right-handed alpha
Helix 9	AA9	A	205	207	Right-handed 310
Helix 10	AB1	A	219	251	Right-handed alpha
Helix 11	AB2	A	264	266	Right-handed 310
Helix 12	AB3	A	274	276	Right-handed 310
Helix 13	AB4	A	277	282	Right-handed alpha
Helix 14	AB5	A	292	300	Right-handed alpha
Helix 15	AB6	A	302	316	Right-handed alpha
Helix 16	AB7	A	323	330	Right-handed alpha
Helix 17	AB8	A	365	384	Right-handed alpha
Helix 18	AB9	A	388	392	Right-handed 310
Helix 19	AC1	A	398	412	Right-handed alpha
Helix 20	AC2	A	413	421	Right-handed alpha
Helix 21	AC3	A	430	444	Right-handed alpha
Helix 22	AC4	A	447	465	Right-handed alpha
Helix 23	AC5	A	468	470	Right-handed 310
Helix 24	AC6	A	471	484	Right-handed alpha
Helix 25	AC7	A	497	502	Right-handed 310
Helix 26	AC8	A	504	508	Right-handed 310
Helix 27	AC9	A	511	533	Right-handed alpha
Helix 28	AD1	A	537	541	Right-handed 310
Helix 29	AD2	A	546	558	Right-handed alpha
Helix 30	AD3	A	564	571	Right-handed alpha
Helix 31	AD4	A	580	587	Right-handed alpha
Helix 32	AD5	A	587	598	Right-handed alpha
Helix 33	AD6	A	599	601	Right-handed 310
Helix 34	AD7	B	294	303	Right-handed alpha
Helix 35	AD8	B	337	343	Right-handed alpha
Helix 36	AD9	B	365	371	Right-handed alpha
Helix 37	AE1	B	403	410	Right-handed alpha
Helix 38	AE2	B	616	627	Right-handed alpha
Helix 39	AE3	B	737	743	Right-handed alpha
Helix 40	AE4	B	746	755	Right-handed alpha
Helix 41	AE5	B	758	783	Right-handed alpha
Helix 42	AE6	B	816	825	Right-handed alpha
Helix 43	AE7	B	840	844	Right-handed 310
Helix 44	AE8	B	848	857	Right-handed alpha
Helix 45	AE9	B	866	884	Right-handed alpha
Helix 46	AF1	B	886	891	Right-handed alpha
Helix 47	AF2	B	897	910	Right-handed alpha
Helix 48	AF3	B	912	919	Right-handed alpha
Helix 49	AF4	B	919	941	Right-handed alpha
Helix 50	AF5	B	945	965	Right-handed alpha
Helix 51	AF6	B	966	968	Right-handed 310
Helix 52	AF7	B	976	984	Right-handed alpha
Helix 53	AF8	B	985	1033	Right-handed alpha
Helix 54	AF9	B	1139	1144	Right-handed alpha
Helix 55	AG1	C	294	303	Right-handed alpha
Helix 56	AG2	C	337	343	Right-handed alpha
Helix 57	AG3	C	365	370	Right-handed alpha
Helix 58	AG4	C	403	410	Right-handed alpha
Helix 59	AG5	C	416	422	Right-handed alpha
Helix 60	AG6	C	502	506	Right-handed 310
Helix 61	AG7	C	619	627	Right-handed alpha
Helix 62	AG8	C	738	743	Right-handed alpha
Helix 63	AG9	C	746	755	Right-handed alpha
Helix 64	AH1	C	760	783	Right-handed alpha
Helix 65	AH2	C	816	826	Right-handed alpha
Helix 66	AH3	C	840	844	Right-handed 310
Helix 67	AH4	C	848	856	Right-handed alpha
Helix 68	AH5	C	866	884	Right-handed alpha
Helix 69	AH6	C	886	891	Right-handed alpha
Helix 70	AH7	C	897	909	Right-handed alpha
Helix 71	AH8	C	912	919	Right-handed alpha
Helix 72	AH9	C	919	941	Right-handed alpha
Helix 73	AI1	C	945	965	Right-handed alpha
Helix 74	AI2	C	966	968	Right-handed 310
Helix 75	AI3	C	976	982	Right-handed alpha
Helix 76	AI4	C	985	1033	Right-handed alpha
Helix 77	AI5	D	294	303	Right-handed alpha
Helix 78	AI6	D	337	343	Right-handed alpha
Helix 79	AI7	D	365	371	Right-handed alpha
Helix 80	AI8	D	403	410	Right-handed alpha
Helix 81	AI9	D	416	422	Right-handed alpha
Helix 82	AJ1	D	502	506	Right-handed 310
Helix 83	AJ2	D	616	627	Right-handed alpha
Helix 84	AJ3	D	737	743	Right-handed alpha
Helix 85	AJ4	D	746	755	Right-handed alpha
Helix 86	AJ5	D	760	783	Right-handed alpha
Helix 87	AJ6	D	816	825	Right-handed alpha
Helix 88	AJ7	D	848	856	Right-handed alpha
Helix 89	AJ8	D	866	884	Right-handed alpha
Helix 90	AJ9	D	886	890	Right-handed 310
Helix 91	AK1	D	897	909	Right-handed alpha
Helix 92	AK2	D	913	918	Right-handed alpha
Helix 93	AK3	D	919	941	Right-handed alpha
Helix 94	AK4	D	945	966	Right-handed alpha
Helix 95	AK5	D	976	984	Right-handed alpha
Helix 96	AK6	D	985	1033	Right-handed alpha

There are 53 sheets in PDB entry 8XZ8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	261	262	first strand
Strand 2	A	486	487	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	26	30	first strand
Strand 2	B	61	65	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	55	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	285	290	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	237	242	anti-parallel
Strand 3	B	101	107	anti-parallel
Strand 4	B	117	118	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	188	193	first strand
Strand 2	B	90	96	anti-parallel
Strand 3	B	266	269	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	129	first strand
Strand 2	B	169	170	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	201	205	first strand
Strand 2	B	224	229	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	316	first strand
Strand 2	B	595	599	anti-parallel
Strand 3	B	609	612	anti-parallel
Strand 4	B	650	651	anti-parallel
Strand 5	B	642	643	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	324	326	first strand
Strand 2	B	538	543	parallel
Strand 3	B	546	551	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	355	358	first strand
Strand 2	B	395	402	anti-parallel
Strand 3	B	508	515	anti-parallel
Strand 4	B	431	437	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	454	first strand
Strand 2	B	492	494	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	473	474	first strand
Strand 2	B	488	489	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	565	566	first strand
Strand 2	C	42	43	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	575	577	first strand
Strand 2	B	584	586	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	655	first strand
Strand 2	B	691	696	parallel
Strand 3	B	670	675	anti-parallel
Strand 4	B	664	667	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	701	704	first strand
Strand 2	C	787	790	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	713	715	first strand
Strand 2	B	1072	1074	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	718	728	first strand
Strand 2	B	1059	1069	anti-parallel
Strand 3	B	1047	1056	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	733	734	first strand
Strand 2	B	860	861	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	787	788	first strand
Strand 2	D	701	702	parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1122	first strand
Strand 2	B	1087	1090	anti-parallel
Strand 3	B	1081	1082	anti-parallel
Strand 4	B	1133	1134	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1094	1097	first strand
Strand 2	B	1102	1105	anti-parallel

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There are 8 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	61	65	anti-parallel
Strand 3	C	264	269	anti-parallel
Strand 4	C	90	95	anti-parallel
Strand 5	C	189	195	anti-parallel
Strand 6	C	201	208	anti-parallel
Strand 7	C	222	229	anti-parallel
Strand 8	C	36	37	parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	55	first strand
Strand 2	C	271	277	anti-parallel
Strand 3	C	288	290	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	237	240	anti-parallel
Strand 3	C	104	107	anti-parallel
Strand 4	C	116	118	anti-parallel
Strand 5	C	128	131	anti-parallel
Strand 6	C	167	170	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	316	first strand
Strand 2	C	594	599	anti-parallel
Strand 3	C	609	613	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	642	645	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	358	first strand
Strand 2	C	395	402	anti-parallel
Strand 3	C	508	514	anti-parallel
Strand 4	C	431	437	anti-parallel
Strand 5	C	374	376	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	361	362	first strand
Strand 2	C	524	525	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	448	454	first strand
Strand 2	C	492	497	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	538	543	first strand
Strand 2	C	546	554	anti-parallel
Strand 3	C	584	588	anti-parallel
Strand 4	C	575	577	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	660	first strand
Strand 2	C	691	697	parallel
Strand 3	C	670	675	anti-parallel
Strand 4	C	664	667	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	701	704	first strand
Strand 2	D	787	790	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	713	715	first strand
Strand 2	C	1072	1074	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	718	728	first strand
Strand 2	C	1059	1069	anti-parallel
Strand 3	C	1047	1056	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	733	734	first strand
Strand 2	C	860	861	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1120	1122	first strand
Strand 2	C	1087	1090	anti-parallel
Strand 3	C	1081	1082	anti-parallel
Strand 4	C	1133	1134	parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1095	1097	first strand
Strand 2	C	1102	1104	anti-parallel

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There are 8 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	27	30	first strand
Strand 2	D	61	65	anti-parallel
Strand 3	D	264	269	anti-parallel
Strand 4	D	90	95	anti-parallel
Strand 5	D	189	195	anti-parallel
Strand 6	D	201	208	anti-parallel
Strand 7	D	222	229	anti-parallel
Strand 8	D	36	37	parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	50	55	first strand
Strand 2	D	271	279	anti-parallel
Strand 3	D	285	290	anti-parallel

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There are 6 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	84	85	first strand
Strand 2	D	237	240	anti-parallel
Strand 3	D	104	107	anti-parallel
Strand 4	D	116	121	anti-parallel
Strand 5	D	126	131	anti-parallel
Strand 6	D	167	170	anti-parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	311	316	first strand
Strand 2	D	594	599	anti-parallel
Strand 3	D	609	613	anti-parallel
Strand 4	D	648	651	anti-parallel
Strand 5	D	642	645	anti-parallel

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There are 5 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	325	326	first strand
Strand 2	D	538	543	parallel
Strand 3	D	546	554	anti-parallel
Strand 4	D	584	588	anti-parallel
Strand 5	D	575	577	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	354	358	first strand
Strand 2	D	395	402	anti-parallel
Strand 3	D	508	514	anti-parallel
Strand 4	D	431	437	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	361	362	first strand
Strand 2	D	524	525	parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	452	454	first strand
Strand 2	D	492	494	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	473	474	first strand
Strand 2	D	488	489	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	654	655	first strand
Strand 2	D	691	696	parallel
Strand 3	D	670	675	anti-parallel
Strand 4	D	664	667	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	713	715	first strand
Strand 2	D	1072	1074	anti-parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	718	722	first strand
Strand 2	D	1059	1069	anti-parallel
Strand 3	D	725	728	anti-parallel

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There are 3 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	718	722	first strand
Strand 2	D	1059	1069	anti-parallel
Strand 3	D	1047	1056	anti-parallel

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There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	733	734	first strand
Strand 2	D	860	861	anti-parallel

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There are 3 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1077	1078	first strand
Strand 2	D	1094	1097	anti-parallel
Strand 3	D	1102	1105	anti-parallel

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There are 4 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1120	1122	first strand
Strand 2	D	1087	1090	anti-parallel
Strand 3	D	1081	1082	anti-parallel
Strand 4	D	1133	1134	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8XZ8

Analysis of interatomic Contacts of Structural Units in PDB entry:
8XZ8