Analysis of interatomic Contacts of Structural Units in PDB entry:
8XZA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8XZA entry

There are 2 chains in PDB entry 8XZA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 THR 333PRO 526
A
 SER 19ASP 614
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 8XZA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
337 343Right-handed alpha
Helix 2
AA2
B
366 371Right-handed alpha
Helix 3
AA3
B
403 410Right-handed alpha
Helix 4
AA4
A
20 53Right-handed alpha
Helix 5
AA5
A
55 81Right-handed alpha
Helix 6
AA6
A
82 83Right-handed 310
Helix 7
AA7
A
84 88Right-handed 310
Helix 8
AA8
A
90 102Right-handed alpha
Helix 9
AA9
A
103 108Right-handed 310
Helix 10
AB1
A
109 130Right-handed alpha
Helix 11
AB2
A
145 154Right-handed alpha
Helix 12
AB3
A
156 193Right-handed alpha
Helix 13
AB4
A
197 204Right-handed alpha
Helix 14
AB5
A
205 207Right-handed 310
Helix 15
AB6
A
219 251Right-handed alpha
Helix 16
AB7
A
264 266Right-handed 310
Helix 17
AB8
A
274 276Right-handed 310
Helix 18
AB9
A
277 282Right-handed alpha
Helix 19
AC1
A
292 300Right-handed alpha
Helix 20
AC2
A
302 316Right-handed alpha
Helix 21
AC3
A
323 330Right-handed alpha
Helix 22
AC4
A
364 384Right-handed alpha
Helix 23
AC5
A
388 392Right-handed 310
Helix 24
AC6
A
398 412Right-handed alpha
Helix 25
AC7
A
413 420Right-handed alpha
Helix 26
AC8
A
430 444Right-handed alpha
Helix 27
AC9
A
447 465Right-handed alpha
Helix 28
AD1
A
471 483Right-handed alpha
Helix 29
AD2
A
497 501Right-handed 310
Helix 30
AD3
A
502 507Right-handed alpha
Helix 31
AD4
A
511 532Right-handed alpha
Helix 32
AD5
A
537 541Right-handed 310
Helix 33
AD6
A
546 558Right-handed alpha
Helix 34
AD7
A
564 571Right-handed alpha
Helix 35
AD8
A
580 587Right-handed alpha
Helix 36
AD9
A
587 598Right-handed alpha
Helix 37
AE1
A
599 601Right-handed 310
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There are 4 sheets in PDB entry 8XZA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
355 358first strand
Strand 2
B
395 399anti-parallel
Strand 3
B
507 513anti-parallel
Strand 4
B
431 437anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
452 454first strand
Strand 2
B
491 493anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
140 141anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 262first strand
Strand 2
A
486 487parallel
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