Analysis of interatomic Contacts of Structural Units in PDB entry:
8Y0P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Y0P entry

There are 3 chains in PDB entry 8Y0P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 149SER 663
B
 ALA 149ASP 665
L
 LEU 4LEU 26
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 8Y0P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
152 161Right-handed alpha
Helix 2
AA2
A
164 179Right-handed alpha
Helix 3
AA3
A
184 189Right-handed alpha
Helix 4
AA4
A
191 205Right-handed alpha
Helix 5
AA5
A
207 222Right-handed alpha
Helix 6
AA6
A
224 234Right-handed alpha
Helix 7
AA7
A
235 243Right-handed alpha
Helix 8
AA8
A
244 246Right-handed 310
Helix 9
AA9
A
248 266Right-handed alpha
Helix 10
AB1
A
268 276Right-handed alpha
Helix 11
AB2
A
277 285Right-handed alpha
Helix 12
AB3
A
286 288Right-handed 310
Helix 13
AB4
A
290 306Right-handed alpha
Helix 14
AB5
A
308 318Right-handed alpha
Helix 15
AB6
A
319 331Right-handed alpha
Helix 16
AB7
A
333 349Right-handed alpha
Helix 17
AB8
A
352 360Right-handed alpha
Helix 18
AB9
A
361 368Right-handed alpha
Helix 19
AC1
A
374 389Right-handed alpha
Helix 20
AC2
A
390 392Right-handed 310
Helix 21
AC3
A
398 409Right-handed alpha
Helix 22
AC4
A
413 429Right-handed alpha
Helix 23
AC5
A
431 441Right-handed alpha
Helix 24
AC6
A
442 455Right-handed alpha
Helix 25
AC7
A
457 472Right-handed alpha
Helix 26
AC8
A
477 488Right-handed alpha
Helix 27
AC9
A
490 497Right-handed alpha
Helix 28
AD1
A
503 518Right-handed alpha
Helix 29
AD2
A
519 522Right-handed 310
Helix 30
AD3
A
523 530Right-handed alpha
Helix 31
AD4
A
531 549Right-handed alpha
Helix 32
AD5
A
565 581Right-handed alpha
Helix 33
AD6
A
583 593Right-handed alpha
Helix 34
AD7
A
595 602Right-handed alpha
Helix 35
AD8
A
603 605Right-handed 310
Helix 36
AD9
A
607 622Right-handed alpha
Helix 37
AE1
A
624 634Right-handed alpha
Helix 38
AE2
A
636 644Right-handed alpha
Helix 39
AE3
A
648 662Right-handed alpha
Helix 40
AE4
B
152 161Right-handed alpha
Helix 41
AE5
B
166 179Right-handed alpha
Helix 42
AE6
B
181 189Right-handed alpha
Helix 43
AE7
B
191 203Right-handed alpha
Helix 44
AE8
B
207 222Right-handed alpha
Helix 45
AE9
B
224 234Right-handed alpha
Helix 46
AF1
B
235 243Right-handed alpha
Helix 47
AF2
B
244 246Right-handed 310
Helix 48
AF3
B
248 266Right-handed alpha
Helix 49
AF4
B
268 276Right-handed alpha
Helix 50
AF5
B
277 285Right-handed alpha
Helix 51
AF6
B
286 288Right-handed 310
Helix 52
AF7
B
290 306Right-handed alpha
Helix 53
AF8
B
308 318Right-handed alpha
Helix 54
AF9
B
319 331Right-handed alpha
Helix 55
AG1
B
333 349Right-handed alpha
Helix 56
AG2
B
352 360Right-handed alpha
Helix 57
AG3
B
361 368Right-handed alpha
Helix 58
AG4
B
374 389Right-handed alpha
Helix 59
AG5
B
390 392Right-handed 310
Helix 60
AG6
B
398 408Right-handed alpha
Helix 61
AG7
B
409 411Right-handed 310
Helix 62
AG8
B
413 429Right-handed alpha
Helix 63
AG9
B
431 441Right-handed alpha
Helix 64
AH1
B
442 455Right-handed alpha
Helix 65
AH2
B
457 472Right-handed alpha
Helix 66
AH3
B
477 488Right-handed alpha
Helix 67
AH4
B
490 497Right-handed alpha
Helix 68
AH5
B
503 518Right-handed alpha
Helix 69
AH6
B
519 522Right-handed 310
Helix 70
AH7
B
523 530Right-handed alpha
Helix 71
AH8
B
531 549Right-handed alpha
Helix 72
AH9
B
565 581Right-handed alpha
Helix 73
AI1
B
583 593Right-handed alpha
Helix 74
AI2
B
595 602Right-handed alpha
Helix 75
AI3
B
603 605Right-handed 310
Helix 76
AI4
B
607 622Right-handed alpha
Helix 77
AI5
B
624 634Right-handed alpha
Helix 78
AI6
B
636 644Right-handed alpha
Helix 79
AI7
B
648 662Right-handed alpha
Helix 80
AI8
L
5 27Right-handed alpha
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There are no sheets in PDB entry 8Y0P
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