Analysis of interatomic Contacts of Structural Units in PDB entry:
8Y2E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Y2E entry

There is 1 chain in PDB entry 8Y2E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 66VAL 620
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 8Y2E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
66 78Right-handed alpha
Helix 2
AA2
A
79 84Right-handed alpha
Helix 3
AA3
A
84 94Right-handed alpha
Helix 4
AA4
A
98 110Right-handed alpha
Helix 5
AA5
A
110 125Right-handed alpha
Helix 6
AA6
A
140 170Right-handed alpha
Helix 7
AA7
A
211 220Right-handed alpha
Helix 8
AA8
A
223 227Right-handed 310
Helix 9
AA9
A
237 255Right-handed alpha
Helix 10
AB1
A
271 286Right-handed alpha
Helix 11
AB2
A
289 296Right-handed alpha
Helix 12
AB3
A
301 306Right-handed alpha
Helix 13
AB4
A
308 323Right-handed alpha
Helix 14
AB5
A
327 334Right-handed alpha
Helix 15
AB6
A
342 376Right-handed alpha
Helix 16
AB7
A
378 382Right-handed 310
Helix 17
AB8
A
389 400Right-handed alpha
Helix 18
AB9
A
403 438Right-handed alpha
Helix 19
AC1
A
445 461Right-handed alpha
Helix 20
AC2
A
462 464Right-handed 310
Helix 21
AC3
A
467 479Right-handed alpha
Helix 22
AC4
A
481 498Right-handed alpha
Helix 23
AC5
A
500 513Right-handed alpha
Helix 24
AC6
A
517 526Right-handed alpha
Helix 25
AC7
A
526 542Right-handed alpha
Helix 26
AC8
A
554 570Right-handed alpha
Helix 27
AC9
A
570 583Right-handed alpha
Helix 28
AD1
A
586 596Right-handed alpha
Helix 29
AD2
A
597 599Right-handed 310
Helix 30
AD3
A
600 605Right-handed alpha
Helix 31
AD4
A
609 612Right-handed 310
Helix 32
AD5
A
613 618Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8Y2E.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
547 548first strand
Strand 2
A
551 552anti-parallel
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